Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012152.1 Kokia drynarioides strain JFW-HI SEQ_127151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  458257

Tables:   1   2   

This is table  2  of  2  ( 158 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
388728--388761
17
2.1
17
88
5
52
50
14
0
35
1.44
392034--392067
16
2.1
16
88
0
50
50
14
14
20
1.78
398798--398887
28
3.2
28
67
17
69
25
21
25
27
1.99
398670--398962
56
5.2
56
84
0
343
25
18
22
34
1.96
398670--398972
112
2.7
112
82
0
381
25
17
23
33
1.96
412279--412332
25
2.1
25
83
10
65
51
11
3
33
1.55
415123--415560
217
2.0
218
89
0
671
27
14
23
34
1.94
416396--416457
5
12.8
5
73
19
51
75
0
3
20
0.94
416396--416457
9
6.4
10
70
20
51
75
0
3
20
0.94
416396--416458
25
2.7
23
78
9
81
76
0
3
20
0.93
417990--418057
34
2.0
34
100
0
136
47
0
35
17
1.48
419439--419625
97
1.9
100
82
9
242
67
6
4
21
1.32
419568--419607
21
1.9
21
84
0
53
70
7
2
20
1.24
419810--419861
25
2.0
25
85
3
68
40
9
11
38
1.74
420309--420873
45
12.6
45
81
3
552
27
16
24
32
1.96
420309--420851
89
6.1
89
81
7
537
27
16
24
31
1.96
420284--420873
134
4.4
133
79
10
544
26
16
24
31
1.97
420947--421362
49
8.5
49
76
2
341
19
23
17
39
1.92
420950--421362
147
2.8
148
79
4
379
20
23
16
40
1.91
420950--421278
98
3.4
98
82
1
390
20
23
16
40
1.91
422372--422432
19
3.2
19
75
13
61
0
18
1
80
0.80
422369--422450
27
3.0
26
81
15
87
1
20
1
76
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
422373--422430
22
2.6
22
77
20
66
0
18
1
79
0.82
428442--428533
46
2.0
46
93
0
157
38
18
17
26
1.93
433262--433313
26
2.0
26
92
0
86
63
11
7
17
1.50
434387--434472
44
2.0
44
81
4
102
72
1
2
24
1.04
434411--434655
99
2.5
99
77
17
253
66
4
4
24
1.28
434578--434610
15
2.1
15
94
5
57
72
6
3
18
1.18
434579--434655
8
10.7
7
69
20
52
67
5
2
24
1.24
434580--434655
20
3.5
21
72
12
64
67
5
2
25
1.25
434847--434900
24
2.2
24
87
6
74
37
5
12
44
1.66
434847--434900
25
2.2
25
90
6
85
37
5
12
44
1.66
437816--437869
10
5.3
10
86
2
63
40
20
5
33
1.76
438267--438355
36
2.5
36
83
3
117
39
21
7
31
1.82
443139--443222
33
2.5
33
86
0
114
14
30
13
41
1.84
445802--445827
7
3.7
7
100
0
52
23
0
0
76
0.78
446115--446141
5
5.4
5
100
0
54
59
0
0
40
0.98
447126--447165
17
2.3
18
83
12
57
67
0
2
30
1.04

Tables:   1   2

The End!