Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012257.1 Kokia drynarioides strain JFW-HI SEQ_127258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16021

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
177--272
17
5.5
17
72
2
75
52
7
4
36
1.49
651--5542
281
17.7
280
77
8
4063
36
14
14
33
1.88
651--5542
839
5.9
830
78
8
4255
36
14
14
33
1.88
651--5542
280
17.7
278
77
8
4092
36
14
14
33
1.88
5536--6849
280
4.7
277
79
7
1298
34
14
15
35
1.88
5536--6849
560
2.4
550
81
8
1443
34
14
15
35
1.88
7046--7135
17
5.2
17
77
4
81
43
0
6
50
1.28
7092--7148
18
3.2
18
80
7
64
49
1
3
45
1.29
7075--7134
29
2.1
29
84
6
77
46
0
5
48
1.24
7829--7882
15
3.5
16
73
16
51
50
1
3
44
1.30
9044--9386
30
11.6
30
73
15
234
39
28
2
30
1.69
9044--9386
59
5.8
60
76
11
302
39
28
2
30
1.69
8980--9386
118
3.4
117
79
10
379
38
28
2
30
1.70
14956--14980
3
8.3
3
100
0
50
68
0
32
0
0.90
14953--15016
12
5.4
12
74
10
53
73
3
23
0
0.97
15908--15981
17
4.2
17
77
10
78
41
0
5
52
1.24
15908--15977
35
1.9
36
86
11
99
42
0
5
51
1.25
15940--15981
6
7.2
6
78
5
50
45
0
4
50
1.23
15908--16012
47
2.3
47
81
8
117
43
0
4
50
1.29
15972--16014
18
2.4
18
88
3
61
46
2
2
48
1.27

Tables:   1

The End!