Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012283.1 Kokia drynarioides strain JFW-HI SEQ_127284, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39158

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4386--4458
16
4.2
17
71
20
53
32
2
1
63
1.17
4437--4493
18
3.4
17
79
11
55
22
1
3
71
1.10
4444--4494
19
2.7
19
80
17
54
19
1
3
74
1.07
5444--5489
24
1.9
24
90
0
74
50
10
6
32
1.63
6248--6316
16
4.6
16
75
14
56
24
14
18
42
1.88
8001--8063
27
2.3
27
86
0
81
23
38
9
28
1.86
10449--10492
9
4.7
9
83
8
52
38
2
0
59
1.10
10499--10539
19
2.2
20
91
8
68
21
4
0
73
1.02
11169--11512
170
2.0
171
98
1
663
25
9
12
52
1.68
11451--11620
48
3.5
48
93
0
277
23
9
14
52
1.70
12055--12211
80
2.0
79
88
1
233
35
20
17
27
1.95
18134--18304
48
3.6
48
91
0
261
24
8
13
53
1.68
18217--18297
28
3.2
28
63
26
70
28
8
12
50
1.69
18744--18892
80
1.9
80
88
2
228
34
21
13
30
1.92
20144--20671
29
17.8
29
69
18
112
36
2
25
35
1.71
20145--20362
58
3.7
58
85
2
267
35
4
25
35
1.75
20316--20661
29
11.6
28
77
14
241
37
1
26
35
1.65
20315--20661
59
5.8
58
74
13
204
37
1
26
35
1.66
20418--20497
38
2.1
39
88
2
117
33
0
27
38
1.57
20360--20559
97
2.1
97
99
0
391
35
0
27
38
1.57
21559--21598
21
1.9
21
85
10
55
35
10
10
45
1.71
22494--22537
12
3.8
12
81
6
63
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22494--22562
6
12.0
6
70
14
56
47
1
0
50
1.09
22488--22537
23
2.2
22
93
6
91
48
0
0
52
1.00
22504--22559
17
3.3
16
78
9
58
48
1
0
50
1.11
22897--23340
201
2.2
200
90
0
708
21
23
19
35
1.96
34724--35233
58
8.7
59
76
8
293
37
4
25
32
1.75
34900--35241
29
11.8
28
72
10
145
39
3
25
31
1.74
37071--37129
17
3.5
17
80
0
73
50
3
0
45
1.18
38725--39158
30
14.7
29
76
11
384
34
32
3
29
1.74
38727--39158
59
7.3
59
86
5
597
34
32
3
29
1.74

Tables:   1

The End!