Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012303.1 Kokia drynarioides strain JFW-HI SEQ_127304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93616

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1353--1405
27
2.0
26
82
10
63
50
5
1
41
1.36
5356--5382
2
13.5
2
100
0
54
48
0
0
51
1.00
5382--5414
5
6.8
5
93
3
50
0
12
0
87
0.53
12642--12672
12
2.6
12
94
0
53
0
45
0
54
0.99
12644--12683
18
2.2
18
90
0
62
2
45
0
52
1.14
15653--15684
2
16.0
2
93
0
55
53
0
46
0
1.00
20736--20773
16
2.4
16
86
4
51
18
7
23
50
1.73
23016--23076
31
2.0
31
83
6
79
54
8
3
34
1.47
23931--23960
15
2.0
15
100
0
60
46
26
20
6
1.75
36795--36838
2
22.0
2
100
0
88
50
0
0
50
1.00
37219--37250
5
6.4
5
96
0
55
62
15
0
21
1.32
37263--37290
6
4.7
6
100
0
56
14
14
71
0
1.15
42318--42342
3
8.3
3
100
0
50
0
32
0
68
0.90
44122--44259
66
2.1
66
97
0
258
45
26
8
18
1.79
46540--46573
6
5.8
6
89
3
52
2
17
50
29
1.61
46663--46715
23
2.4
22
84
9
63
30
0
3
66
1.10
52360--52755
185
2.2
187
86
5
558
29
21
13
35
1.92
57497--57545
22
2.2
23
78
10
57
57
10
8
24
1.59
57739--57899
39
4.2
39
79
6
157
36
8
12
43
1.72
57745--57890
76
1.9
78
82
2
188
34
8
11
45
1.71
58291--58328
18
2.3
17
83
16
53
34
2
5
57
1.35
67623--67871
123
2.0
123
96
0
462
45
22
11
21
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71414--71465
23
2.3
23
82
0
59
26
11
17
44
1.83
74577--74618
22
1.9
22
90
0
66
40
23
4
30
1.75
78205--78282
30
2.6
30
84
8
95
47
0
1
51
1.09
84564--84608
18
2.5
18
85
0
63
17
13
15
53
1.73

Tables:   1

The End!