Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012383.1 Kokia drynarioides strain JFW-HI SEQ_127387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67693

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3321--3457
48
3.1
48
65
25
129
38
5
6
48
1.53
3268--3680
83
5.0
83
92
1
675
41
4
5
48
1.47
3268--3680
167
2.5
166
94
1
711
41
4
5
48
1.47
3773--3830
22
2.7
21
84
7
80
39
27
10
22
1.86
4900--4943
19
2.4
18
85
7
61
22
4
4
68
1.27
6077--6187
30
3.7
29
81
4
114
27
8
2
61
1.38
7074--7158
43
2.0
43
81
4
100
43
5
16
34
1.72
7013--7212
105
1.9
104
85
3
276
44
11
14
30
1.80
7119--7538
58
7.0
59
74
13
236
38
15
17
29
1.90
7182--7542
58
6.1
58
76
11
259
37
15
17
29
1.91
7120--7538
121
3.5
118
78
11
363
38
15
17
29
1.90
8878--8922
22
2.1
22
87
4
65
60
0
15
24
1.36
14393--14537
55
2.6
55
83
3
184
50
14
4
30
1.64
28055--28171
59
2.0
58
81
8
139
25
20
13
40
1.89
28216--28297
31
2.6
31
98
0
155
39
20
17
23
1.92
30882--30935
26
2.1
26
96
0
99
29
7
33
29
1.85
31325--31396
24
3.0
24
95
0
135
31
16
16
34
1.92
33123--33290
84
2.0
84
100
0
336
32
16
13
38
1.87
34480--34522
9
4.9
9
77
5
52
11
2
2
83
0.83
34480--34522
17
2.5
17
84
3
59
11
2
2
83
0.83
39451--39486
18
1.9
18
88
5
54
50
16
5
27
1.68
42590--42636
25
2.0
23
87
8
67
57
21
0
21
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42731--42764
16
2.1
16
88
0
50
70
0
0
29
0.87
45734--45760
6
4.5
6
100
0
54
0
51
33
14
1.43
58427--58473
6
7.7
6
95
4
85
34
0
31
34
1.58
58430--58485
18
3.1
19
90
7
82
33
0
28
37
1.58
62756--62820
12
5.7
11
80
12
69
76
12
1
9
1.07
62732--62852
34
3.6
33
74
12
95
70
14
2
13
1.27
62780--62889
22
5.2
22
70
13
79
70
12
3
13
1.30
62812--62876
18
3.3
18
75
16
58
69
12
4
13
1.34
62806--62896
40
2.2
42
86
3
132
67
16
4
12
1.38
63563--63693
61
2.1
61
91
2
219
37
14
13
34
1.86
63730--63894
59
2.8
58
76
8
159
28
17
18
35
1.93
65210--65262
24
2.2
24
79
0
61
9
20
39
30
1.84
67308--67439
41
3.1
41
62
29
96
46
7
3
41
1.50
67269--67693
86
4.9
86
92
2
715
49
4
3
41
1.40
67269--67693
177
2.4
172
93
1
715
49
4
3
41
1.40

Tables:   1

The End!