Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012448.1 Kokia drynarioides strain JFW-HI SEQ_127452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100133

Tables:   1   

This is table  1  of  1  ( 67 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--65
15
2.5
15
90
0
56
29
2
8
59
1.40
14--54
3
13.7
3
84
0
55
34
0
4
60
1.18
14--112
9
10.8
9
70
12
58
42
1
4
52
1.27
59--110
14
4.0
14
73
19
58
51
0
0
48
1.00
60--108
24
2.0
24
100
0
98
48
0
0
51
1.00
775--840
6
11.5
6
73
15
59
51
1
0
46
1.10
777--840
17
3.8
17
89
0
101
53
1
0
45
1.10
772--826
23
2.4
23
79
11
60
52
1
0
45
1.11
1270--1835
218
2.6
218
89
1
888
21
22
21
34
1.96
2607--2695
46
1.9
46
84
8
119
12
29
13
44
1.80
8401--8859
30
15.7
28
76
16
350
30
3
30
35
1.73
8387--8854
59
8.0
59
84
7
521
31
2
30
35
1.73
9880--9916
15
2.5
15
90
0
56
29
2
8
59
1.40
9865--9905
3
13.7
3
84
0
55
34
0
4
60
1.18
9865--9963
9
10.8
9
70
12
58
42
1
4
52
1.27
9910--9961
14
4.0
14
73
19
58
51
0
0
48
1.00
9911--9959
24
2.0
24
100
0
98
48
0
0
51
1.00
10614--10701
17
5.2
16
77
8
68
51
2
1
45
1.21
10626--10701
6
13.5
6
70
22
58
51
2
0
46
1.15
10614--10665
11
4.8
10
80
15
59
51
0
1
46
1.12
10628--10680
27
2.0
27
92
0
88
56
1
0
41
1.10
12954--13001
2
24.0
2
100
0
96
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13524--13571
2
24.0
2
100
0
96
50
0
0
50
1.00
19688--19730
14
3.1
14
75
0
50
76
0
0
23
0.78
22484--22572
27
3.3
26
75
7
88
39
15
22
22
1.92
30218--30367
74
2.0
74
97
0
282
34
17
20
28
1.95
31409--31469
27
2.3
27
80
5
70
29
8
27
34
1.86
32282--32362
37
2.2
37
88
2
117
19
7
28
44
1.78
38550--38585
18
1.9
19
88
5
56
63
8
2
25
1.36
39258--39310
18
3.0
18
80
5
63
54
15
5
24
1.62
45634--45686
28
2.0
28
85
7
74
50
1
1
45
1.23
57397--57436
18
2.2
18
86
8
55
57
5
7
30
1.48
57611--57664
23
2.3
23
100
0
108
14
24
11
50
1.75
68465--68521
20
2.7
21
75
10
53
68
0
3
28
1.06
70099--70130
11
2.9
11
90
0
55
25
9
0
65
1.22
72793--72948
56
2.7
57
82
9
185
43
1
3
51
1.28
73113--73150
16
2.4
16
90
0
58
31
31
2
34
1.72
73122--73152
16
1.9
16
100
0
62
25
32
6
35
1.82
83327--83497
87
2.0
87
97
0
324
41
18
11
28
1.86
83442--83553
56
2.0
56
96
0
206
38
22
9
29
1.86
84857--84929
29
2.6
29
79
12
89
67
1
0
31
1.00
85125--88013
221
12.7
221
82
7
3300
35
13
16
34
1.88
85967--86044
39
2.0
39
97
0
147
28
21
17
32
1.96
86473--86512
20
2.0
20
100
0
80
25
20
0
55
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85125--88013
903
3.2
892
86
5
3852
35
13
16
34
1.88
87597--87638
20
2.1
20
95
0
75
19
26
0
54
1.44
87876--88153
140
2.0
140
96
0
511
33
12
15
37
1.86
88276--100133
221
51.8
221
84
7
14322
34
13
16
35
1.88
89333--89374
20
2.1
20
90
0
66
21
19
0
59
1.38
90016--90057
20
2.1
20
82
8
50
23
16
0
59
1.37
90256--90298
20
2.2
20
95
0
77
23
20
0
55
1.43
90498--90539
20
2.1
20
95
0
75
16
30
0
52
1.44
90739--90780
20
2.1
20
90
0
66
23
19
0
57
1.41
91641--91682
20
2.1
20
90
0
66
21
19
0
59
1.38
91883--91920
20
1.9
20
94
0
67
18
26
0
55
1.43
92785--92822
20
1.9
20
94
0
67
15
28
0
55
1.41
93027--93068
20
2.1
20
95
0
75
26
16
0
57
1.40
93268--93307
20
2.0
20
95
0
71
22
22
0
55
1.44
93730--93771
20
2.1
20
100
0
84
23
19
0
57
1.41
93968--94008
20
2.0
20
95
0
73
17
29
0
53
1.44
94216--94254
20
2.0
20
89
0
60
25
20
0
53
1.45
94513--94591
39
2.0
39
100
0
158
27
31
5
35
1.79
95813--95854
20
2.1
20
95
0
75
21
21
0
57
1.41
96056--96094
20
2.0
20
89
0
60
23
30
0
46
1.53
96295--96337
20
2.2
20
95
0
77
23
20
0
55
1.43
96594--96672
39
2.0
39
100
0
158
27
31
5
35
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97237--97278
20
2.1
20
95
0
75
21
21
0
57
1.41

Tables:   1

The End!