Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012494.1 Kokia drynarioides strain JFW-HI SEQ_127498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30089

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
850--958
35
3.1
34
84
10
125
44
0
2
53
1.15
881--958
6
13.5
6
74
12
74
46
0
1
52
1.08
884--939
11
4.9
11
82
10
60
39
0
1
58
1.08
850--958
52
2.1
52
87
0
155
44
0
2
53
1.15
850--958
17
6.3
17
83
6
130
44
0
2
53
1.15
1621--1665
19
2.4
18
81
3
54
51
4
11
33
1.58
2376--2529
77
2.0
77
100
0
308
28
18
7
45
1.77
2797--2881
25
3.2
25
66
26
66
36
28
5
29
1.81
2750--3306
59
9.5
59
81
4
578
32
29
5
32
1.81
2755--3268
29
17.7
29
74
15
379
32
29
5
32
1.81
15067--15740
206
3.3
206
82
1
780
37
19
21
21
1.95
15413--15478
37
1.9
34
82
14
82
36
18
19
25
1.94
16066--16163
17
5.3
18
73
13
65
44
1
3
51
1.24
16097--16163
6
11.5
6
73
17
61
47
1
1
49
1.19
16066--16146
41
2.0
41
87
0
117
43
1
3
51
1.27
16066--16145
29
2.8
26
77
17
79
42
1
3
52
1.27
16099--16165
17
3.9
16
83
11
71
46
1
1
50
1.19
16825--16869
19
2.4
18
81
3
54
51
4
11
33
1.58
17892--18235
29
11.7
29
77
10
288
31
29
3
34
1.75
17892--18234
59
5.8
59
82
4
388
31
29
3
34
1.75
20036--20709
206
3.3
206
82
1
780
37
19
21
21
1.95
20382--20447
37
1.9
34
82
14
82
36
18
19
25
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21035--21132
17
5.3
18
73
13
65
44
1
3
51
1.24
21066--21132
6
11.5
6
73
17
61
47
1
1
49
1.19
21035--21115
41
2.0
41
87
0
117
43
1
3
51
1.27
21035--21114
29
2.8
26
77
17
79
42
1
3
52
1.27
21068--21134
17
3.9
16
83
11
71
46
1
1
50
1.19
21794--21838
19
2.4
18
81
3
54
51
4
11
33
1.58
22861--23204
29
11.7
29
77
10
288
31
29
3
34
1.75
22861--23203
59
5.8
59
82
4
388
31
29
3
34
1.75
24160--30089
282
21.1
279
79
4
5560
36
14
15
33
1.88

Tables:   1

The End!