Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012545.1 Kokia drynarioides strain JFW-HI SEQ_127554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  182398

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
235--641
59
6.9
59
90
3
604
29
3
33
33
1.76
1677--1704
3
9.3
3
100
0
56
32
0
0
67
0.91
2371--2450
17
4.7
17
87
0
88
52
5
0
42
1.23
2371--2450
34
2.4
33
85
2
97
52
5
0
42
1.23
16079--16119
20
2.0
20
95
0
73
46
7
19
26
1.76
20047--20095
21
2.2
24
85
10
68
46
16
4
32
1.65
22041--22071
10
2.9
11
90
9
55
64
6
9
19
1.45
22672--22726
22
2.5
22
90
3
83
10
20
23
45
1.82
35298--35344
25
2.0
23
87
8
67
38
4
4
53
1.40
37488--37541
5
10.0
5
86
9
63
24
1
0
74
0.92
37488--37541
17
3.3
16
84
10
65
24
1
0
74
0.92
38470--38530
14
4.7
13
84
9
72
78
1
11
8
1.02
38470--38543
12
5.8
12
76
16
60
77
1
14
6
1.05
38470--38549
11
6.5
11
71
20
52
77
2
13
6
1.06
43654--43707
23
2.2
24
83
6
65
57
5
1
35
1.33
43687--43737
16
3.1
16
82
2
57
52
1
9
35
1.46
45459--45524
33
2.0
33
100
0
132
30
12
15
42
1.83
46699--46826
42
3.0
42
100
0
256
29
23
9
37
1.86
52346--52523
87
2.0
87
100
0
356
47
6
12
33
1.68
52851--52892
23
2.0
22
86
13
61
71
4
2
21
1.16
54560--54589
12
2.5
12
94
0
51
43
0
43
13
1.43
73165--73210
25
1.9
23
86
8
65
32
4
6
56
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73413--73458
25
1.9
25
86
8
69
32
4
6
56
1.45
73073--73576
248
2.0
248
96
0
936
32
8
11
47
1.70
74465--74526
12
5.3
12
69
21
51
50
1
9
38
1.45
97102--97306
108
1.9
107
84
6
270
30
31
20
18
1.96
97747--97846
47
2.1
47
100
0
200
28
27
16
29
1.97
100846--100883
2
19.0
2
88
0
58
44
0
2
52
1.14
106885--106946
28
2.2
28
85
8
81
37
0
1
61
1.06
109906--110004
23
4.4
22
78
5
92
39
26
22
12
1.89
112530--112623
45
2.1
45
100
0
188
32
10
37
19
1.86
116265--116299
2
17.5
2
100
0
70
0
48
0
51
1.00
116299--116323
2
12.5
2
100
0
50
48
0
0
52
1.00
122945--123072
42
3.0
41
84
4
121
21
17
30
31
1.96
122966--123085
42
2.9
42
87
2
125
20
15
32
31
1.93
124821--124845
2
12.5
2
100
0
50
52
0
48
0
1.00
127726--127767
22
1.9
22
85
0
57
76
7
0
16
1.00
137416--137506
45
2.0
45
95
0
164
48
15
13
23
1.80
137614--137644
2
15.5
2
100
0
62
51
0
0
48
1.00
137663--137696
16
2.1
16
88
0
50
35
0
0
64
0.94
146723--146758
18
2.1
18
89
5
56
52
5
8
33
1.55
150589--150628
15
2.7
15
92
0
62
40
2
55
2
1.27
150588--150644
21
2.8
21
78
5
64
38
1
57
1
1.19
156741--156780
3
13.3
3
100
0
80
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
166788--166845
29
2.0
29
90
3
91
31
8
13
46
1.74
168754--168807
24
2.4
22
72
9
54
57
7
3
31
1.44
169751--169776
7
3.7
7
100
0
52
46
11
0
42
1.40
170727--170755
9
3.2
9
100
0
58
10
34
0
55
1.34
172393--172426
2
17.0
2
93
0
59
0
2
50
47
1.16
173937--174776
210
4.0
210
90
1
1290
29
22
15
32
1.95

Tables:   1

The End!