Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012572.1 Kokia drynarioides strain JFW-HI SEQ_127581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  420729

Tables:   1   2   

This is table  2  of  2  ( 166 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218755--219040
30
9.7
30
83
2
319
16
26
19
37
1.93
218755--219040
59
4.8
59
84
1
349
16
26
19
37
1.93
218766--219040
89
3.1
89
91
0
444
16
26
19
38
1.92
220625--220682
6
9.7
6
100
0
116
34
0
15
50
1.45
230446--230496
15
3.4
15
68
10
50
7
13
52
25
1.67
230443--230498
18
3.4
18
68
27
61
7
12
55
25
1.62
230435--230509
30
2.5
30
97
0
141
5
13
54
26
1.60
234370--234398
12
2.5
12
94
5
51
68
0
0
31
0.89
239248--239282
10
3.3
10
92
8
52
0
74
0
25
0.82
248068--248094
2
13.5
2
100
0
54
48
0
0
51
1.00
259547--259586
13
3.2
13
80
20
57
20
5
10
65
1.42
260074--260118
22
2.1
22
83
4
56
35
0
0
64
0.94
260076--260132
26
2.3
23
78
18
62
40
0
0
59
0.97
261024--261054
6
5.3
6
92
7
55
51
32
0
16
1.44
262169--262206
20
1.9
20
94
0
67
60
0
0
39
0.97
262167--262217
20
2.6
19
81
9
66
58
0
0
41
0.98
268296--268353
19
3.0
19
80
7
64
53
5
1
39
1.33
268373--268423
22
2.4
23
78
15
65
66
1
1
29
1.13
272210--272242
8
4.2
8
96
3
59
24
0
0
75
0.80
277690--277723
14
2.5
13
85
4
50
23
2
0
73
0.97
278038--278076
3
13.0
3
94
0
69
66
2
0
30
1.05
284607--284669
21
2.9
22
76
19
60
36
1
1
60
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
296941--296991
12
4.5
12
78
9
54
70
1
0
27
0.98
296925--297005
33
2.5
33
91
4
119
64
2
0
33
1.07
296948--297000
10
5.0
10
76
13
52
66
1
0
32
1.03
296946--297003
17
3.5
17
73
21
68
67
1
0
31
1.01
298585--298712
62
2.1
62
100
0
256
29
9
19
41
1.83
306815--306842
11
2.5
11
100
0
56
64
0
0
35
0.94
311007--311049
16
2.6
17
85
3
61
0
11
16
72
1.13
315719--315853
57
2.3
58
87
3
191
17
31
29
21
1.96
319528--319618
47
2.0
47
91
4
150
43
15
1
39
1.54
328553--328623
35
2.1
34
91
2
115
53
11
2
32
1.51
331800--331833
17
1.9
18
94
5
61
35
0
0
64
0.94
340006--340111
53
2.0
53
100
0
212
28
15
5
50
1.66
340614--340651
16
2.4
16
100
0
76
47
0
18
34
1.49
342578--342640
30
2.1
31
88
8
94
38
7
9
44
1.66
349090--349138
22
2.3
22
82
10
57
20
2
4
73
1.10
352453--352501
2
24.5
2
95
0
89
51
2
0
46
1.12
353913--353945
3
11.0
3
93
0
57
66
3
0
30
1.06
371916--372001
42
2.0
42
97
0
163
45
11
27
15
1.80
376020--376247
116
2.0
115
95
2
413
33
21
15
29
1.94
384658--384711
28
2.0
27
85
3
72
53
5
1
38
1.35
385722--385921
30
6.7
30
80
7
205
37
29
2
31
1.69
385722--385925
59
3.5
59
82
6
245
36
30
1
30
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
386294--386346
27
2.0
27
96
0
97
32
20
15
32
1.93
416862--416915
23
2.4
22
84
12
65
50
1
3
44
1.30

Tables:   1   2

The End!