Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012662.1 Kokia drynarioides strain JFW-HI SEQ_127673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  335207

Tables:   1   2   

This is table  2  of  2  ( 167 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231492--231538
21
2.2
21
84
0
67
51
12
8
27
1.69
232494--232645
80
1.9
80
90
2
243
28
13
21
36
1.91
233091--233259
48
3.5
48
90
0
241
54
11
9
24
1.65
236381--236429
21
2.6
18
87
9
62
2
26
2
69
1.10
236360--236408
6
8.0
6
77
4
53
2
18
2
77
0.96
239374--239557
48
3.9
48
88
2
221
51
13
9
25
1.71
241194--241429
118
2.0
118
99
0
463
33
11
19
35
1.89
242486--242584
28
3.5
28
77
2
101
36
16
24
23
1.94
242534--242592
28
2.1
28
81
3
66
32
20
25
22
1.98
242630--242689
27
2.2
27
87
0
84
36
18
23
21
1.95
242683--242740
27
2.1
27
87
0
80
29
22
20
27
1.99
250274--250415
68
2.1
68
100
0
284
28
19
17
34
1.95
251653--251704
17
2.8
18
81
18
63
36
0
3
59
1.16
267505--267631
38
3.4
38
81
3
132
33
17
17
32
1.93
267524--267968
77
5.8
77
79
2
423
35
18
13
31
1.90
267570--267946
153
2.4
154
85
3
483
36
18
14
31
1.90
267525--267964
39
11.4
39
75
6
326
35
18
13
31
1.90
268090--268127
19
2.0
19
85
10
51
42
7
10
39
1.69
270022--270095
24
3.1
24
82
0
85
24
24
21
29
1.99
273777--273950
23
7.8
23
74
13
130
42
20
22
13
1.88
282752--282794
9
4.7
9
82
2
50
62
0
0
37
0.95
283150--283229
24
3.4
25
67
26
75
40
7
7
45
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
283138--283230
46
2.0
46
100
0
186
36
8
8
46
1.65
284314--284342
13
2.2
13
100
0
58
13
6
44
34
1.71
288252--288383
66
2.0
66
89
0
201
21
12
22
43
1.86
291797--291851
21
2.6
20
85
8
65
29
0
9
61
1.26
291814--291856
19
2.2
19
88
12
61
32
0
6
60
1.23
291823--291868
19
2.3
20
82
14
60
30
0
6
63
1.20
292047--292084
15
2.4
16
82
4
51
42
0
2
55
1.14
293563--293620
21
2.8
21
94
0
98
31
17
15
36
1.91
305948--306040
21
4.5
21
74
4
82
49
20
0
30
1.49
307758--307799
21
2.0
21
85
0
57
59
7
9
23
1.53
319712--319830
31
3.8
31
79
8
118
36
9
10
44
1.70
319712--319830
62
1.9
62
83
6
152
36
9
10
44
1.70
319782--319839
31
1.9
29
86
13
82
39
13
6
39
1.72
321482--321570
3
30.7
3
75
8
69
71
23
2
2
1.08
321484--321678
35
5.6
36
83
8
208
68
20
3
7
1.29
321482--321678
12
16.8
12
76
8
147
69
20
3
7
1.28
321489--321678
105
1.8
106
81
7
244
69
19
3
7
1.28
325183--325293
30
3.8
29
75
15
95
36
4
26
32
1.76
326401--326443
16
2.6
16
82
14
52
41
0
4
53
1.21
327230--327290
6
10.0
6
73
16
54
54
1
1
42
1.20
327230--327318
17
5.4
17
81
10
112
53
3
2
40
1.30
327827--328307
49
9.9
48
74
12
376
15
24
19
40
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327758--328319
98
5.8
97
80
8
448
15
24
19
40
1.90
327786--328304
147
3.5
147
79
6
473
15
24
19
40
1.90
328734--328769
18
2.0
18
94
0
63
58
11
11
19
1.62

Tables:   1   2

The End!