Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012756.1 Kokia drynarioides strain JFW-HI SEQ_127767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78836

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1567--1646
41
2.0
41
92
5
135
18
1
13
66
1.32
4409--4433
4
6.2
4
100
0
50
24
0
24
52
1.48
24582--24859
132
2.1
132
88
0
412
22
23
24
29
1.99
32190--32229
20
2.0
21
85
5
55
52
15
0
32
1.43
34676--35282
304
2.0
303
96
0
1115
29
13
24
32
1.93
39156--39237
31
2.6
31
100
0
164
23
2
23
51
1.60
39283--39313
12
2.7
12
95
5
55
16
0
16
67
1.23
48172--48214
2
22.0
2
95
4
79
51
0
0
48
1.00
48247--48364
53
2.3
51
82
8
132
30
15
24
29
1.95
49367--49392
13
2.0
13
100
0
52
30
0
23
46
1.53
57117--57416
51
5.9
51
80
1
332
32
13
23
31
1.93
57948--58249
151
2.0
151
96
0
559
26
10
25
36
1.89
58297--58356
21
2.8
22
82
7
79
33
10
23
33
1.88
59611--59661
21
2.4
21
87
6
68
35
27
11
25
1.91
66660--66710
21
2.4
22
83
6
61
29
11
25
33
1.91
67131--67165
3
11.7
3
100
0
70
68
0
31
0
0.90
67249--67592
168
2.0
170
85
5
475
39
16
16
27
1.90
74840--74989
51
3.0
50
87
3
196
28
13
6
52
1.65
78134--78237
37
2.7
37
75
7
100
33
25
17
24
1.96

Tables:   1

The End!