Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012898.1 Kokia drynarioides strain JFW-HI SEQ_127912, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12486

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1194
8
4.5
8
100
0
72
36
0
0
63
0.94
1665--1856
96
2.0
96
85
4
262
38
14
18
28
1.90
2091--2406
29
10.7
29
76
10
211
32
5
29
32
1.80
4094--4177
25
3.3
25
68
15
73
15
11
32
40
1.84
4199--4275
6
13.3
6
74
17
65
48
1
3
46
1.28
4220--4278
11
5.4
11
78
8
66
54
1
1
42
1.20
4199--4275
17
4.5
17
83
8
93
48
1
3
46
1.28
4222--4277
27
2.1
27
83
6
69
53
1
1
42
1.21
4601--5158
204
2.7
204
91
1
895
21
24
20
33
1.97
7498--7533
8
4.5
8
100
0
72
36
0
0
63
0.94
8004--8195
96
2.0
96
85
4
262
38
14
18
28
1.90
8430--8745
29
10.7
29
76
10
211
32
5
29
32
1.80
10433--10516
25
3.3
25
68
15
73
15
11
32
40
1.84
10538--10614
6
13.3
6
74
17
65
48
1
3
46
1.28
10559--10617
11
5.4
11
78
8
66
54
1
1
42
1.20
10538--10614
17
4.5
17
83
8
93
48
1
3
46
1.28
10561--10616
27
2.1
27
83
6
69
53
1
1
42
1.21
10940--11497
204
2.7
204
91
1
895
21
24
20
33
1.97

Tables:   1

The End!