Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013005.1 Kokia drynarioides strain JFW-HI SEQ_128023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64349

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2826--2868
22
2.0
22
100
0
86
30
23
4
41
1.74
4026--4087
29
2.1
29
100
0
124
29
16
19
35
1.93
10315--10410
49
2.0
49
81
4
113
33
21
16
28
1.95
34800--34858
24
2.4
25
83
8
77
66
20
11
1
1.33
34925--34984
28
2.0
31
87
9
90
50
21
5
23
1.68
40393--40437
21
2.1
21
87
0
63
24
40
8
26
1.84
43704--43818
54
2.2
53
85
7
153
33
19
24
23
1.97
45558--54797
216
42.8
215
81
3
9846
39
15
16
27
1.89
45558--60774
432
34.8
432
77
8
12084
39
15
16
27
1.89
53920--55396
216
6.8
221
77
10
1327
40
15
15
28
1.88
54980--55354
197
1.9
196
85
1
509
41
14
14
29
1.86
55423--56325
216
4.2
216
87
1
1094
39
15
16
28
1.89
56327--58548
216
10.3
215
81
3
2323
39
15
16
27
1.89
58556--60774
216
10.3
216
82
3
2427
39
16
15
27
1.89
60777--61658
216
4.1
216
82
3
1058
40
15
16
28
1.89
60085--61483
721
1.9
720
84
3
1846
39
16
16
27
1.90
62527--63100
289
2.0
289
87
0
815
40
15
17
26
1.89
62820--63489
216
3.1
216
83
3
826
39
15
16
28
1.89
63030--63996
505
1.9
504
87
3
1408
40
14
15
28
1.88
63293--63822
289
1.8
288
88
3
805
41
15
15
27
1.87
62446--64247
721
2.5
718
82
4
2199
39
15
16
27
1.89
63541--64247
216
3.3
216
83
2
823
40
16
16
27
1.89

Tables:   1

The End!