Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013095.1 Kokia drynarioides strain JFW-HI SEQ_128113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  427744

Tables:   1   2   

This is table  2  of  2  ( 137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393524--393577
18
3.0
18
83
0
72
9
25
24
40
1.85
394056--394116
32
1.9
32
90
6
97
40
8
6
44
1.60
394981--395026
17
2.9
16
83
9
58
82
8
0
8
0.84
397233--397288
17
3.4
16
90
7
85
46
0
1
51
1.11
398063--398102
21
2.0
20
90
5
62
45
0
0
55
0.99
399279--399537
29
8.9
27
73
15
187
31
33
4
30
1.78
399276--399539
59
4.5
59
90
1
406
31
33
4
29
1.79
401635--401668
18
1.9
18
88
5
52
38
8
2
50
1.49
403967--404056
23
4.0
23
81
2
103
13
21
21
44
1.85
403968--404059
46
2.0
46
93
4
161
11
20
20
46
1.82
405876--405918
21
2.0
22
81
4
52
67
4
4
23
1.28
406792--406851
28
2.1
28
87
0
84
68
5
15
11
1.36
410954--410991
18
2.1
18
100
0
76
42
28
5
23
1.76
412939--412992
2
27.5
2
96
3
101
51
0
0
48
1.00
416967--416999
6
5.5
6
96
0
57
15
12
21
51
1.75
418949--418975
6
4.5
6
100
0
54
62
0
37
0
0.95
427478--427503
6
4.3
6
100
0
52
15
0
69
15
1.20

Tables:   1   2

The End!