Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013205.1 Kokia drynarioides strain JFW-HI SEQ_128224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  139165

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205--270
4
16.2
4
80
9
71
0
34
0
65
0.93
205--271
13
4.7
15
76
20
72
0
35
0
64
0.94
211--268
29
2.1
27
87
6
80
0
34
0
65
0.93
3190--3238
17
2.9
16
79
8
53
30
8
16
44
1.76
12594--12639
23
2.0
23
95
0
83
28
17
23
30
1.97
16332--16365
17
2.1
17
88
5
52
50
14
0
35
1.44
18710--18758
24
2.0
24
81
14
57
42
0
46
10
1.37
19468--19506
19
2.1
19
90
0
60
51
17
17
12
1.76
24733--24790
28
2.1
28
86
0
80
36
29
17
17
1.92
24743--24868
28
4.5
28
77
5
121
32
28
18
20
1.96
24747--24880
56
2.4
56
84
2
171
32
26
20
20
1.97
26974--27212
52
4.6
52
78
10
229
28
12
23
34
1.92
26972--27212
104
2.3
105
81
9
271
29
12
23
34
1.92
34102--34338
52
4.5
52
77
8
239
29
15
23
31
1.95
34103--34338
105
2.3
104
80
6
255
30
15
23
31
1.95
44791--44931
23
6.1
23
76
10
108
12
24
20
43
1.86
50405--50465
30
2.0
30
100
0
122
39
3
9
47
1.53
51139--51238
23
4.3
22
73
15
76
15
27
17
41
1.88
51139--51273
48
2.8
46
79
10
121
15
26
15
42
1.87
51139--51238
48
2.1
48
83
7
125
15
27
17
41
1.88
55229--55294
34
1.9
34
82
11
82
24
18
10
46
1.80
55228--55307
17
4.6
17
77
9
65
22
20
11
46
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55659--55749
40
2.3
40
100
0
182
26
17
29
26
1.98
59886--59934
19
2.8
17
82
14
64
63
12
8
16
1.51
62282--62311
15
2.0
15
93
0
51
63
6
16
13
1.50
67540--67585
6
7.3
6
85
9
56
4
13
0
82
0.81
67540--67585
13
3.7
12
83
11
56
4
13
0
82
0.81
67543--67585
19
2.3
19
84
8
52
4
11
0
83
0.78
81586--81661
37
2.1
36
85
11
102
40
1
2
55
1.22
81586--81661
12
6.8
11
72
19
52
40
1
2
55
1.22
83188--83225
15
2.7
15
88
8
53
44
5
0
50
1.24
87062--87106
10
4.3
11
81
18
60
0
17
0
82
0.68
87698--87742
18
2.6
17
79
6
54
60
15
11
13
1.60
87704--87759
21
2.8
20
75
17
55
57
14
12
16
1.66
89989--90023
14
2.5
14
90
9
54
68
2
14
14
1.32
95321--95471
74
2.0
74
98
0
293
29
25
13
31
1.94
111281--111386
46
2.3
46
79
6
117
24
15
18
41
1.89
112309--112378
20
3.5
20
94
0
113
25
31
12
30
1.93
112037--112662
293
2.1
294
86
4
850
33
25
13
28
1.93
118966--119028
32
1.9
33
83
3
83
19
26
0
53
1.45
129380--129489
56
2.0
57
84
10
147
30
27
13
28
1.94
133992--134141
58
2.6
58
86
1
219
35
18
7
39
1.78
137485--137543
24
2.5
24
76
15
61
37
15
20
27
1.92
138645--138697
18
3.0
17
72
8
52
58
0
1
39
1.09

Tables:   1

The End!