Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013274.1 Kokia drynarioides strain JFW-HI SEQ_128295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  160686

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9854--9928
24
3.1
24
90
0
123
26
12
6
54
1.61
10889--10963
24
3.1
24
84
0
96
25
13
8
53
1.66
16464--16577
36
3.1
36
72
14
113
2
53
0
42
1.20
17050--17102
22
2.4
22
83
0
61
5
54
0
39
1.24
20037--20076
8
5.0
8
85
8
55
0
60
0
40
0.97
20037--20089
16
3.3
16
86
5
63
1
58
1
37
1.20
22037--22140
52
2.0
52
96
0
190
50
16
8
24
1.72
32231--32262
15
2.2
14
94
5
55
12
31
15
40
1.85
36092--36303
41
5.1
41
84
5
268
24
27
10
37
1.89
36080--36303
82
2.7
81
86
4
297
24
26
11
37
1.89
36092--36350
82
3.1
80
83
7
286
24
27
10
37
1.89
37079--37126
22
2.2
21
77
3
51
35
12
0
52
1.40
43156--43465
41
7.5
41
83
4
345
25
24
10
39
1.87
73809--73867
13
4.5
13
78
16
52
6
11
1
79
0.99
74792--74838
6
8.3
6
90
4
64
80
2
0
17
0.80
74791--74838
5
8.8
5
86
13
60
79
2
0
18
0.84
78366--78404
14
2.7
15
80
8
53
56
10
7
25
1.59
80295--80336
20
2.1
20
90
0
66
42
2
33
21
1.66
86592--86971
138
2.7
139
80
8
405
29
17
18
33
1.94
86963--87075
36
3.1
36
86
5
140
28
21
13
37
1.91
87190--87246
24
2.4
24
77
11
64
28
3
8
59
1.44
87646--87697
26
2.0
26
100
0
104
42
7
3
46
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88421--88473
27
2.0
27
85
7
72
26
9
30
33
1.88
88637--88682
24
2.0
23
87
12
67
41
2
10
45
1.51
93113--93234
59
2.1
58
89
6
185
33
0
16
50
1.46
95051--95085
17
2.1
17
100
0
70
11
0
45
42
1.40
95408--95872
38
12.5
38
75
10
316
30
15
13
40
1.86
95629--95825
36
5.4
36
82
5
218
26
17
14
40
1.89
95415--95865
73
6.1
74
77
6
340
29
15
13
40
1.86
109148--109186
13
2.8
13
84
7
51
51
12
0
35
1.40
117187--117262
39
1.9
40
91
2
127
40
9
2
47
1.49
141790--141888
40
2.5
40
84
0
135
40
13
21
25
1.89
144730--144755
13
2.0
13
100
0
52
38
7
23
30
1.83
145547--145843
43
7.0
43
91
2
395
25
20
26
27
1.99
146567--146605
20
1.9
19
90
10
60
76
0
17
5
0.96
146554--146606
14
3.5
14
73
16
52
79
0
16
3
0.88
146554--146608
5
10.8
5
74
18
51
78
0
18
3
0.90
149825--149851
12
2.2
12
100
0
54
37
22
14
25
1.93
153630--153724
41
2.3
41
96
0
172
28
6
28
36
1.81
153998--154025
14
2.0
14
100
0
56
0
21
7
71
1.09
155862--155897
17
2.2
17
95
5
65
63
0
16
19
1.30
159405--159434
2
15.0
2
100
0
60
50
0
0
50
1.00
160653--160686
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!