Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013335.1 Kokia drynarioides strain JFW-HI SEQ_128357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98821

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19592--19616
13
1.9
13
100
0
50
48
12
16
24
1.79
20866--20953
11
8.4
11
73
22
66
48
1
1
48
1.16
20866--20977
50
2.2
52
90
6
178
49
0
0
49
1.13
21560--21757
99
2.0
99
91
0
324
35
8
32
23
1.84
21842--21894
14
3.2
17
75
20
67
50
0
33
15
1.44
21845--21896
18
3.1
18
73
21
67
46
0
36
17
1.48
21913--21957
20
2.2
20
88
8
63
48
0
4
46
1.22
25243--25987
382
2.0
382
97
0
1400
34
21
16
27
1.95
33176--33262
26
3.4
26
81
7
97
32
17
8
42
1.78
40126--40163
9
4.2
9
83
12
51
2
18
0
78
0.86
50872--50905
15
2.2
16
89
5
52
67
0
11
20
1.21
53562--53665
43
2.4
43
86
0
136
52
14
20
12
1.73
53803--53838
12
3.0
12
91
0
54
22
22
8
47
1.77
55038--55293
126
2.0
126
97
0
485
28
11
14
45
1.80
56472--56497
12
2.2
12
100
0
52
15
7
23
53
1.67
57686--57715
15
2.0
15
93
0
51
30
6
0
63
1.20
74625--74664
21
1.9
21
85
10
55
62
12
5
20
1.48
83428--83492
32
2.0
32
100
0
130
33
24
12
29
1.92
85149--85219
23
3.1
23
87
0
88
23
21
18
36
1.95
95989--96029
20
2.0
20
90
4
64
75
0
0
24
0.80
95989--96028
7
6.0
7
97
2
66
75
0
0
25
0.81
95992--96047
7
8.0
7
84
13
53
78
1
1
17
0.92

Tables:   1

The End!