Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013346.1 Kokia drynarioides strain JFW-HI SEQ_128369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70917

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4757--4806
16
3.1
16
78
16
57
74
4
0
22
0.99
4757--4799
8
5.2
8
83
5
50
76
2
0
20
0.89
5982--6110
30
4.3
30
88
3
172
41
24
3
31
1.70
6953--6997
22
2.1
22
84
8
58
22
26
0
51
1.49
9363--9403
20
1.9
22
85
14
59
63
0
19
17
1.31
10043--10087
6
7.7
6
92
2
56
0
17
22
60
1.37
10042--10087
12
3.9
12
85
2
67
0
17
21
60
1.35
10727--10792
21
2.9
23
76
17
66
3
39
7
50
1.46
10739--10789
21
2.4
21
90
0
75
3
35
7
52
1.49
12725--12778
24
2.2
24
100
0
108
9
42
24
24
1.83
16264--16308
16
2.7
16
79
6
54
53
0
0
46
1.00
24735--24762
2
14.0
2
100
0
56
0
0
50
50
1.00
37684--37732
22
2.2
22
88
0
80
51
8
8
32
1.61
41142--41176
2
17.5
2
100
0
70
51
0
48
0
1.00
44164--44446
76
3.8
76
78
3
295
21
21
21
36
1.96
49129--49167
6
6.5
6
87
0
51
46
0
30
23
1.53
50362--50461
41
2.4
41
88
0
146
19
24
27
30
1.98
58066--58164
23
4.3
23
82
0
108
12
21
21
45
1.84
58067--58206
69
2.0
68
82
13
171
13
21
20
45
1.85
61734--62179
193
2.3
194
84
3
569
26
25
19
28
1.99
67418--67514
25
3.9
25
95
0
167
38
16
31
13
1.87
67418--67539
50
2.4
50
86
4
165
38
18
30
13
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67492--67593
22
4.5
22
81
8
107
45
22
20
11
1.84
69427--69484
22
2.6
23
83
10
84
10
24
18
46
1.80

Tables:   1

The End!