Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013370.1 Kokia drynarioides strain JFW-HI SEQ_128393, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87046

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--134
4
21.0
4
74
11
66
0
34
0
65
0.93
56--135
20
3.9
20
83
9
99
0
36
0
63
0.94
50--134
17
5.2
17
78
13
81
0
34
0
65
0.93
2912--2965
17
3.1
17
82
12
74
29
0
22
48
1.51
8707--8779
26
2.7
27
81
6
78
52
1
1
45
1.18
9117--9142
12
2.2
12
100
0
52
69
15
0
15
1.20
15787--15822
14
2.6
14
90
0
54
33
11
2
52
1.51
22737--23251
261
2.0
255
82
7
612
32
7
26
32
1.85
34065--34424
194
1.8
193
85
4
508
21
18
22
36
1.95
49405--49438
5
6.8
5
100
0
68
17
61
0
20
1.34
49660--49687
5
5.6
5
100
0
56
39
17
42
0
1.50
50460--50509
3
16.7
3
100
0
100
66
0
0
34
0.92
52157--52243
39
2.2
39
87
0
129
28
10
6
54
1.60
52177--52239
19
3.3
19
68
27
60
26
11
4
57
1.53
52769--52793
13
1.9
13
100
0
50
8
28
16
48
1.74
54553--54586
17
2.0
17
100
0
68
23
17
29
29
1.97
60624--60705
21
4.0
20
70
16
69
28
4
10
56
1.54
65742--65781
20
2.0
20
90
0
62
30
15
15
40
1.87
70411--70489
31
2.5
31
76
8
81
39
15
17
27
1.90
74367--74445
31
2.5
32
81
8
90
62
5
5
27
1.38
74541--74608
18
3.5
19
73
13
66
29
2
1
66
1.15
74533--74599
25
2.5
26
80
9
73
29
1
1
67
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74534--74648
41
2.8
40
75
15
112
30
2
2
64
1.21
85468--85503
10
3.6
10
100
0
72
52
16
0
30
1.44

Tables:   1

The End!