Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013514.1 Kokia drynarioides strain JFW-HI SEQ_128540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  166302

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19714--19770
16
3.6
16
79
6
53
68
8
3
19
1.31
20350--20867
151
3.4
152
87
3
708
42
10
4
42
1.58
31137--31165
13
2.2
13
100
0
58
27
6
6
58
1.50
31145--31195
26
2.0
26
88
0
75
37
3
5
52
1.44
31393--31498
48
2.2
48
96
0
203
26
14
25
33
1.94
35033--35073
13
3.1
13
85
3
55
68
0
31
0
0.90
35409--35442
16
2.1
16
94
0
59
8
23
23
44
1.81
37086--37149
33
1.9
33
84
6
85
54
21
9
14
1.67
37164--37221
24
2.4
25
77
8
75
70
12
1
15
1.24
56353--56391
19
2.2
17
86
9
51
56
0
41
2
1.13
66500--66542
23
1.9
22
85
4
59
46
16
0
37
1.47
68872--68926
20
2.8
20
78
13
60
45
10
9
34
1.71
68953--69022
34
2.1
34
100
0
140
35
17
15
31
1.91
70915--70991
37
2.1
37
95
0
136
33
22
29
14
1.93
73800--73858
17
3.5
17
80
0
55
20
10
13
55
1.66
74414--74446
6
5.5
6
86
13
50
81
0
18
0
0.68
74408--74446
12
3.5
11
83
16
53
82
0
17
0
0.68
74408--74447
13
3.4
12
87
12
57
82
0
17
0
0.67
78310--78356
17
2.8
17
80
0
58
17
12
12
57
1.65
80945--81205
91
2.9
90
83
5
318
41
2
20
35
1.66
80899--81203
30
10.3
30
76
8
268
40
2
21
35
1.67
81576--81619
20
2.1
21
87
4
63
11
13
2
72
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82133--82169
15
2.4
16
95
4
67
35
0
0
64
0.94
83321--83921
39
15.4
39
71
6
356
25
18
31
23
1.97
83398--83922
78
6.7
79
77
6
433
24
18
32
23
1.97
84158--84259
48
2.1
48
96
0
186
15
28
17
38
1.91
91210--91287
39
2.0
39
100
0
156
15
20
17
46
1.84
95102--95328
29
7.7
29
74
7
116
38
3
21
37
1.71
95094--95231
58
2.3
59
79
6
136
39
2
23
34
1.70
95181--95409
30
7.7
29
76
12
178
41
2
20
35
1.66
95175--95393
59
3.7
58
77
7
208
42
2
19
36
1.64
95176--95411
89
2.6
88
80
5
269
41
2
20
36
1.66
104526--104563
17
2.2
17
95
0
67
44
13
21
21
1.85
113815--113976
77
2.1
76
95
1
288
27
29
19
24
1.98
114523--114547
13
1.9
13
100
0
50
68
8
24
0
1.16
123605--123672
26
2.6
26
76
4
66
32
20
22
25
1.98
145593--145665
20
3.5
21
74
9
60
47
8
6
36
1.60
152915--152985
35
2.0
35
100
0
142
30
19
21
28
1.97
163342--163371
14
2.1
14
93
0
51
23
13
6
56
1.60

Tables:   1

The End!