Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013643.1 Kokia drynarioides strain JFW-HI SEQ_128671, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80214

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3301--3338
16
2.5
15
87
8
58
68
0
5
26
1.11
3730--3785
15
3.5
15
73
21
51
12
3
16
67
1.35
4121--4159
20
2.0
20
84
0
51
25
0
10
64
1.25
8778--8858
35
2.3
35
100
0
162
32
8
28
30
1.87
9440--9489
18
2.8
18
77
17
50
32
8
4
56
1.47
16383--16419
14
2.6
15
83
12
51
83
2
13
0
0.74
19929--19982
28
1.9
28
81
7
65
42
3
1
51
1.30
28548--28665
38
3.1
37
62
9
94
37
7
20
34
1.81
28523--28641
38
3.1
38
61
9
89
33
8
21
36
1.84
28518--28671
76
2.0
76
98
0
299
37
8
19
35
1.82
36988--37065
35
2.2
34
88
6
120
8
30
2
57
1.43
47928--47984
24
2.3
25
81
6
62
75
3
5
15
1.12
50142--50181
21
1.9
21
85
10
55
32
7
17
42
1.77
52131--52187
25
2.3
26
84
6
73
36
1
1
59
1.18
55372--55418
22
2.2
21
82
17
53
57
2
6
34
1.36
60098--60122
2
12.5
2
100
0
50
52
0
48
0
1.00
66396--66427
6
5.3
6
100
0
64
34
50
15
0
1.45
71152--71871
124
5.9
123
85
3
900
49
10
10
29
1.70
71149--71853
245
2.9
243
88
3
1013
49
10
11
29
1.71
76767--76810
19
2.3
20
80
11
56
27
22
22
27
1.99
76778--76815
19
2.0
19
100
0
76
26
26
21
26
1.99
77980--78017
19
2.0
19
89
0
58
63
0
0
36
0.95

Tables:   1

The End!