Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013677.1 Kokia drynarioides strain JFW-HI SEQ_128705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  390591

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
340699--340880
58
3.1
58
77
3
204
24
20
7
47
1.75
340627--340892
29
9.3
29
72
10
147
24
18
8
48
1.75
340828--340909
29
2.9
28
80
8
78
25
15
7
51
1.69
340706--340927
116
1.9
116
81
7
272
27
18
6
47
1.72
341966--342098
40
3.3
40
92
0
221
22
27
9
40
1.85
342124--342229
43
2.5
43
84
4
135
29
21
12
36
1.90
342223--343720
499
3.0
497
93
0
2577
37
19
8
34
1.81
346688--346977
52
5.6
52
87
0
420
37
24
13
25
1.92
352559--352872
29
11.0
28
71
10
163
22
16
9
50
1.74
352826--352880
28
2.0
28
85
0
74
23
16
5
54
1.63
353134--353319
58
3.2
56
75
5
176
24
18
8
48
1.75
353242--353316
28
2.7
27
76
15
71
24
16
9
50
1.73
353243--353316
29
2.6
27
80
14
78
22
16
9
51
1.73
353309--353363
28
2.0
28
85
0
74
23
16
5
54
1.63
359319--359414
29
3.3
29
79
1
102
34
3
22
39
1.70
360730--360760
12
2.7
12
95
5
55
16
12
41
29
1.85
360742--360793
22
2.4
22
83
0
59
13
9
44
32
1.76
373725--373807
30
2.8
29
76
7
76
38
4
22
33
1.76
373754--373816
30
2.1
30
82
5
74
34
3
22
39
1.70
374015--374039
9
2.8
9
100
0
50
76
0
0
24
0.80
379376--379413
18
2.1
18
100
0
76
28
21
26
23
1.99
384479--384525
24
2.0
24
91
0
76
57
10
2
29
1.44

Tables:   1   2

The End!