Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013732.1 Kokia drynarioides strain JFW-HI SEQ_128760, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39145

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--243
30
4.9
30
82
0
168
32
4
23
39
1.76
3039--3126
43
2.0
43
88
0
131
22
23
19
34
1.97
3714--3745
12
2.7
12
90
0
55
53
12
6
28
1.62
9627--9672
20
2.3
20
88
0
65
69
6
6
17
1.32
9614--9665
24
2.1
25
85
3
70
65
5
7
21
1.40
9799--9985
30
6.2
30
80
5
180
32
3
24
40
1.71
11041--11076
17
2.2
16
90
5
54
83
2
0
13
0.76
11467--11515
18
2.7
17
78
12
53
67
6
4
22
1.30
11684--11894
30
7.0
28
81
9
170
33
4
22
38
1.75
11684--11893
60
3.5
60
79
8
237
33
4
22
39
1.75
11724--11889
91
1.8
90
82
8
212
34
4
21
39
1.74
19272--19496
67
3.4
66
80
4
236
23
21
16
38
1.93
33633--33695
30
2.1
31
85
8
85
68
0
1
30
0.99
33877--33924
22
2.1
23
88
3
71
37
0
27
35
1.57
35206--35330
40
3.2
39
80
11
148
26
5
10
57
1.54
35242--35321
36
2.2
36
91
4
126
28
5
12
53
1.59
35247--35303
18
3.2
18
67
18
55
26
5
14
54
1.61
35482--36118
77
8.3
77
83
4
745
33
11
9
45
1.73
35467--36123
305
2.1
306
86
4
905
32
11
10
45
1.73

Tables:   1

The End!