Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013850.1 Kokia drynarioides strain JFW-HI SEQ_128878, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41398

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
178--433
93
2.7
92
77
6
262
28
18
13
39
1.89
338--4142
216
17.6
216
81
1
3969
27
16
15
40
1.89
338--4142
432
8.8
432
84
0
4421
27
16
15
40
1.89
4151--4691
216
2.5
215
87
3
748
26
17
16
39
1.90
4500--4539
21
2.0
21
85
5
55
32
7
15
45
1.74
10544--11378
215
3.9
215
83
2
922
27
18
13
40
1.88
17520--17649
67
1.9
67
96
0
242
34
20
11
33
1.89
17821--17872
5
10.4
5
87
0
50
5
21
3
69
1.26
18929--18957
15
1.9
15
100
0
58
27
20
27
24
1.99
19027--20550
216
7.1
217
80
3
1664
28
17
14
39
1.89
19054--20567
431
3.5
430
87
2
1925
28
17
15
39
1.89
21037--21083
19
2.5
19
92
0
76
46
19
17
17
1.84
28445--28813
195
1.9
196
83
5
487
41
14
17
26
1.87
28642--33452
216
22.6
216
78
6
4348
41
14
16
28
1.87
28405--33459
429
11.9
431
78
6
4642
41
14
16
28
1.87
28642--33477
430
11.3
431
78
6
4525
41
14
16
28
1.87
33115--33845
368
2.0
369
81
4
857
39
14
17
28
1.89
33485--35166
216
7.8
216
79
5
1637
40
15
16
27
1.88
35166--36408
216
5.8
216
81
4
1352
40
14
17
28
1.88

Tables:   1

The End!