Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013859.1 Kokia drynarioides strain JFW-HI SEQ_128887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  257970

Tables:   1   2   

This is table  2  of  2  ( 170 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179908--180098
95
2.0
96
82
5
235
37
10
19
31
1.87
180490--180821
29
11.3
30
79
10
337
32
1
28
37
1.66
180386--180821
59
7.4
59
77
8
340
32
2
28
36
1.71
180454--180821
88
4.2
90
79
11
368
32
2
28
36
1.69
180490--180833
59
5.8
57
80
7
350
32
1
28
37
1.66
181912--182035
3
39.0
3
69
13
61
33
4
1
59
1.28
181921--182029
13
8.5
12
74
8
56
34
3
1
59
1.26
182790--182862
17
4.2
17
87
1
92
52
1
2
43
1.24
182790--182853
6
11.2
6
77
9
62
51
1
3
43
1.26
184743--184772
15
2.1
14
93
6
51
66
3
30
0
1.07
186838--187200
148
2.4
148
84
4
446
32
16
34
16
1.91
186887--187444
247
2.3
248
80
5
603
33
16
33
17
1.92
186986--187629
297
2.2
297
80
3
699
33
16
31
18
1.93
186837--187607
99
7.8
99
78
4
601
33
16
32
17
1.93
186823--187607
49
15.9
49
72
9
430
33
16
32
17
1.93
188186--188210
5
5.0
5
100
0
50
20
0
0
80
0.72
188519--188561
18
2.4
18
100
0
86
60
9
9
20
1.55
189069--189111
22
2.0
22
86
9
61
20
6
0
72
1.08
194733--194791
22
2.8
20
76
21
57
20
3
0
76
0.93
196279--196323
19
2.4
19
81
7
56
37
0
4
57
1.19
197125--197171
21
2.2
22
88
3
69
19
4
4
72
1.18
197388--197479
6
16.5
6
70
15
54
42
0
5
52
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197391--197479
17
5.4
17
80
6
94
40
0
5
53
1.24
197382--197479
34
2.9
34
82
7
112
41
0
5
53
1.23
197524--197558
18
1.9
18
88
0
52
42
37
5
14
1.69
198165--198214
16
3.1
16
88
0
73
62
0
2
36
1.07
198164--198213
3
16.0
3
79
8
55
60
0
2
38
1.09
198150--198213
25
2.7
23
83
7
76
57
0
1
40
1.08
198150--198211
13
5.1
13
75
15
53
56
0
1
41
1.09
198500--198533
3
11.3
3
100
0
68
67
0
0
32
0.91
199221--199564
30
11.8
28
75
10
228
36
25
4
34
1.76
199230--199563
58
5.7
55
73
11
224
36
25
4
33
1.75
208253--208610
179
2.0
179
98
0
698
35
6
13
44
1.70
211232--211271
14
2.9
14
84
0
53
40
10
7
42
1.67
215925--215972
16
3.0
16
84
0
60
52
0
20
27
1.47
217038--217075
12
3.1
13
81
11
53
39
2
5
52
1.38
225108--225168
31
2.0
32
87
6
90
49
0
18
32
1.48
232863--232916
26
2.2
24
83
12
65
50
7
1
40
1.41
233828--233886
12
4.9
12
77
8
57
76
13
1
8
1.09
233814--233865
21
2.5
21
81
9
54
71
17
1
9
1.22
233857--233887
15
2.1
14
94
5
53
83
6
0
9
0.79
233876--233928
21
2.5
21
84
0
61
67
13
7
11
1.40
233894--233942
20
2.4
20
90
10
73
65
10
10
14
1.47
235466--235517
27
1.9
27
92
0
86
50
0
3
46
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
235461--235523
27
2.4
25
80
15
72
50
0
3
46
1.17
239822--239846
11
2.3
11
100
0
50
12
0
44
44
1.41
240061--240105
13
3.5
12
85
14
63
53
6
2
37
1.40
248551--248597
2
25.5
2
83
16
66
44
0
0
55
0.99
248604--248647
14
3.2
13
87
9
61
54
0
4
40
1.21
249766--249808
17
2.4
18
84
3
52
48
2
13
34
1.56

Tables:   1   2

The End!