Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013891.1 Kokia drynarioides strain JFW-HI SEQ_128919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43929

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102--166
33
1.9
34
84
3
87
44
7
13
33
1.73
262--294
17
1.9
17
88
11
50
66
6
0
27
1.15
443--1469
213
4.9
213
82
7
1120
28
17
14
39
1.89
1874--1965
39
2.4
39
84
0
130
27
4
15
53
1.60
5273--5367
11
8.1
11
78
14
75
66
1
28
4
1.17
5300--5345
13
3.7
13
82
11
69
69
0
28
2
1.00
5289--5345
24
2.4
24
100
0
114
68
0
28
3
1.06
10890--10926
19
1.9
19
89
10
58
8
13
5
72
1.24
12618--12675
29
2.0
29
93
0
98
18
22
22
36
1.95
13255--13380
50
2.5
50
84
5
155
38
11
14
35
1.83
14988--15019
10
3.0
11
90
9
57
25
0
9
65
1.22
15537--15693
80
2.0
79
93
1
269
29
13
22
35
1.92
16536--16579
21
2.3
18
85
14
54
20
22
6
50
1.72
18403--43926
430
59.3
430
76
9
18726
29
17
14
39
1.88
18403--20200
215
8.3
215
80
5
1722
29
17
14
39
1.89
20201--26288
215
28.4
214
77
7
5005
29
17
14
39
1.88
21399--21773
197
1.9
197
82
2
475
29
17
14
39
1.89
26084--26484
196
2.0
196
84
2
520
28
17
14
38
1.89
26287--28731
215
11.4
215
80
4
2364
28
16
14
40
1.88
28537--28925
194
2.0
195
85
4
527
29
15
13
41
1.86
28732--30656
215
9.0
215
72
12
1256
29
17
13
39
1.88
30660--32546
215
8.8
216
78
5
1702
29
17
14
39
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29568--33639
431
9.6
429
78
8
3513
29
17
14
39
1.89
31569--33639
215
9.7
214
78
6
1904
29
17
14
39
1.88
33729--43926
215
47.4
215
75
9
7166
28
17
14
39
1.88
38553--43926
429
12.6
427
81
5
5617
28
17
14
39
1.88

Tables:   1

The End!