Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014218.1 Kokia drynarioides strain JFW-HI SEQ_129251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48549

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--83
17
4.8
18
82
11
111
55
2
0
42
1.13
1--83
34
2.4
34
100
0
166
55
2
0
42
1.13
2444--2486
14
3.2
14
83
6
54
65
2
32
0
1.06
2439--2485
21
2.1
22
88
7
69
68
2
29
0
1.02
2642--2676
18
1.9
18
94
0
61
25
0
14
60
1.35
3583--3631
16
3.2
16
73
26
61
59
8
0
32
1.27
4922--5006
43
2.0
43
83
4
109
31
11
8
48
1.69
5574--5710
45
3.0
45
88
0
184
32
25
21
21
1.98
5702--5744
21
2.0
21
86
4
59
20
32
13
32
1.92
5970--6028
21
2.8
21
80
7
66
42
25
5
27
1.76
5967--6028
7
8.9
7
71
7
54
41
24
4
29
1.75
8699--8750
4
13.0
4
84
8
52
5
28
0
65
1.16
8888--8939
27
2.0
27
81
11
63
25
34
13
26
1.93
10484--10520
18
2.1
18
90
5
58
43
0
0
56
0.99
11377--11457
27
2.7
29
79
14
85
30
2
7
59
1.38
17481--17543
30
2.1
30
90
0
99
39
6
15
38
1.73
17486--17550
30
2.2
30
85
0
85
46
6
13
33
1.69
24751--24807
29
1.9
30
85
3
80
36
10
17
35
1.84
32726--32778
10
5.6
10
74
17
51
49
1
0
49
1.12
32719--32778
19
3.2
18
72
13
59
48
1
1
48
1.21
33059--33096
19
2.0
20
84
5
51
13
26
18
42
1.87
33525--33558
9
3.8
9
88
0
50
14
0
0
85
0.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33519--33561
20
2.2
20
82
0
50
18
0
2
79
0.85
34412--34445
7
4.7
7
85
7
50
67
0
0
32
0.91
34412--34445
15
2.4
14
90
5
50
67
0
0
32
0.91
37699--37745
25
2.0
25
83
8
62
29
4
4
61
1.34
38306--38353
24
2.0
24
100
0
96
50
25
0
25
1.50
42424--42457
13
2.6
13
86
13
52
29
0
26
44
1.55
45478--45507
6
5.0
6
100
0
60
16
0
66
16
1.25

Tables:   1

The End!