Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014240.1 Kokia drynarioides strain JFW-HI SEQ_129273, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  412615

Tables:   1   2   

This is table  2  of  2  ( 158 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367066--367352
48
6.0
48
75
7
285
38
16
22
22
1.93
366799--367474
316
2.1
316
85
1
917
41
16
19
22
1.90
367240--368331
268
4.2
259
83
7
1075
42
16
19
21
1.90
367240--368331
123
8.5
124
76
10
874
42
16
19
21
1.90
367382--367474
48
1.9
48
84
0
123
45
15
17
22
1.85
367505--367597
48
1.9
48
86
0
132
41
11
22
23
1.87
367115--367838
391
1.9
391
86
2
1060
41
16
19
22
1.90
367773--367864
48
1.9
48
86
0
130
42
11
21
23
1.86
368041--368135
48
2.0
48
93
0
163
41
16
23
18
1.90
369951--370023
29
2.5
29
75
4
85
31
20
5
42
1.75
373074--373110
10
3.6
10
92
7
65
2
8
0
89
0.58
373074--373111
11
3.5
11
89
3
60
2
7
0
89
0.57
394294--394331
20
1.9
20
89
10
60
63
2
26
7
1.35
396146--396248
29
3.5
29
81
7
100
34
8
21
34
1.84
396195--396258
29
2.2
30
88
2
94
40
12
21
25
1.88
396205--396357
30
5.3
29
75
12
127
35
7
24
32
1.84
396234--396358
29
4.3
31
74
18
101
33
6
25
34
1.82
396360--396448
29
3.1
30
82
8
121
43
2
17
35
1.62
396339--396505
30
5.8
29
69
16
107
40
3
19
36
1.69
398409--398663
78
3.3
78
81
0
276
23
19
32
25
1.98
398401--398878
39
12.3
39
70
9
179
25
18
30
25
1.98
398548--398800
117
2.2
115
78
5
265
27
19
28
24
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
398620--398878
78
3.3
75
81
7
250
26
19
28
25
1.99
398460--398898
39
11.3
39
71
6
217
25
19
28
25
1.99
398657--398921
78
3.4
78
80
3
264
27
19
27
25
1.99
398830--398919
39
2.3
39
82
0
99
28
18
28
23
1.98
400284--400340
22
2.6
21
81
15
62
1
19
0
78
0.83
400290--400329
6
6.7
6
83
11
55
0
17
0
82
0.67
400285--400354
27
2.7
25
79
20
81
4
14
0
81
0.84
400290--400337
24
2.0
25
88
12
73
0
18
0
81
0.70
400290--400351
11
5.5
10
77
21
52
3
14
0
82
0.80
400291--400340
18
2.8
17
85
14
66
0
18
0
82
0.68
401252--401286
18
1.9
18
88
11
54
0
20
0
80
0.72
405991--406064
28
2.5
29
75
16
80
35
8
24
32
1.85
406082--406247
29
5.6
30
81
5
160
41
3
21
34
1.68
408553--408603
23
2.2
24
82
10
61
52
0
21
25
1.47
410866--410892
3
9.0
3
100
0
54
66
0
0
33
0.92
412427--412469
22
2.0
22
86
9
61
51
13
4
30
1.62

Tables:   1   2

The End!