Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014274.1 Kokia drynarioides strain JFW-HI SEQ_129307, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  333927

Tables:   1   2   

This is table  2  of  2  ( 167 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218113--218188
28
2.7
28
80
11
84
28
7
7
55
1.57
218140--218196
28
2.0
28
86
6
80
31
8
5
54
1.53
223384--223618
128
1.8
129
92
0
400
22
15
9
52
1.71
223706--223735
16
1.9
15
93
6
51
16
0
10
73
1.09
223740--223821
31
2.9
27
77
12
76
18
9
4
67
1.37
233107--233148
16
2.6
16
82
14
50
50
2
9
38
1.48
238558--238664
29
3.6
29
75
14
92
35
2
1
59
1.23
248367--248446
40
2.0
40
95
0
142
35
12
12
40
1.81
249543--249667
53
2.4
54
79
11
136
27
23
16
32
1.96
249639--249697
30
2.0
30
100
0
118
27
23
13
35
1.92
249589--249749
82
2.0
81
88
3
243
27
23
14
33
1.94
249669--249813
52
2.8
52
97
0
281
27
24
15
32
1.95
249543--249801
134
1.9
134
86
7
375
27
23
15
32
1.95
253512--253552
14
3.1
14
82
10
50
43
0
56
0
0.99
272085--272124
17
2.3
17
86
4
53
82
2
2
12
0.87
274017--274107
41
2.2
41
96
0
164
36
27
7
28
1.84
283696--283820
43
2.9
43
86
1
169
31
8
19
40
1.82
284009--284071
27
2.3
27
83
10
74
20
15
17
46
1.85
284062--284150
46
1.9
46
86
4
126
22
12
15
49
1.78
292099--292524
220
1.9
220
80
7
488
36
15
11
36
1.83
295578--295610
3
11.0
3
100
0
66
0
0
66
33
0.92
300072--300123
21
2.5
21
93
0
86
34
9
26
28
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301051--301076
2
13.0
2
100
0
52
50
50
0
0
1.00
304831--304878
17
3.0
16
76
8
53
27
0
2
70
0.98
309524--309587
29
2.2
29
82
2
74
28
4
3
64
1.29
310125--310228
53
2.0
53
83
7
131
44
6
4
44
1.51
310174--310203
15
2.0
15
93
0
51
43
0
0
56
0.99
311264--311309
20
2.3
20
81
3
58
47
8
13
30
1.72
313788--313848
29
2.0
31
84
6
81
39
31
3
26
1.72
317549--317605
29
1.9
30
92
3
98
50
5
3
40
1.42
323492--323566
23
3.4
23
68
15
68
44
6
13
36
1.70
323482--323571
44
2.0
44
95
0
162
43
5
12
38
1.65
325924--325966
21
2.0
21
90
0
68
18
0
2
79
0.85
325983--326037
24
2.3
25
87
9
87
7
27
20
45
1.77
326440--326508
28
2.5
27
79
6
75
66
1
2
28
1.14
326603--326646
11
3.8
11
83
16
54
27
0
0
72
0.85
326591--326646
12
4.7
12
75
16
53
26
1
1
69
1.08
328997--329111
52
2.3
50
86
4
151
48
2
4
44
1.36
329086--329134
20
2.6
20
81
9
59
48
4
4
42
1.40
332513--332582
17
4.1
16
82
10
77
40
0
4
55
1.19
332512--332572
17
3.6
18
84
8
83
39
0
3
57
1.15
332544--332584
6
7.2
6
78
10
50
43
0
2
53
1.13
332510--332614
46
2.3
46
88
3
149
40
1
2
54
1.26
332545--332584
11
3.5
11
86
3
53
42
0
2
55
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
332530--332595
29
2.3
28
86
5
87
37
1
3
57
1.23
332512--332584
35
2.1
34
85
12
96
39
0
4
56
1.19
332547--332602
28
1.9
28
89
7
85
39
3
1
55
1.28

Tables:   1   2

The End!