Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014316.1 Kokia drynarioides strain JFW-HI SEQ_129353, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111642

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5522--5615
35
2.6
36
88
1
145
19
12
29
38
1.89
6219--6417
35
5.7
35
82
5
226
21
12
29
36
1.90
6216--6417
70
3.0
67
83
5
253
21
12
29
36
1.90
9426--9525
36
2.8
36
87
1
139
24
12
27
37
1.90
9502--9555
27
2.0
27
92
0
90
22
12
27
37
1.91
14348--14510
35
4.6
35
82
2
182
22
12
25
39
1.90
15350--15410
27
2.4
25
84
12
88
21
19
32
26
1.97
15438--15486
20
2.4
21
90
6
75
46
8
16
28
1.75
18272--18366
26
3.7
26
88
0
127
27
0
12
60
1.33
18481--18514
14
2.4
14
85
0
50
26
0
26
47
1.53
19399--19428
16
1.9
15
93
6
51
23
0
36
40
1.55
19404--19491
31
2.8
31
82
0
86
26
3
25
45
1.69
19509--19536
12
2.3
12
100
0
56
42
7
7
42
1.59
19552--19596
21
2.1
22
87
4
65
53
20
0
26
1.46
19545--19597
21
2.5
21
79
11
63
50
22
0
26
1.49
19578--19629
14
3.7
14
76
0
59
46
28
0
25
1.53
23323--23360
19
2.0
20
84
5
51
44
0
10
44
1.38
25148--25228
22
3.7
22
73
12
67
34
6
13
45
1.69
30351--30413
25
2.5
24
82
10
81
61
3
4
30
1.32
31112--31167
28
2.0
29
85
3
78
53
12
7
26
1.64
33693--33830
50
2.7
51
80
11
158
36
11
16
34
1.85
34025--34057
17
1.9
17
88
11
50
66
6
0
27
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36497--36527
9
3.6
9
95
4
55
0
16
0
83
0.64
36531--36612
30
2.9
28
78
12
87
18
13
4
63
1.47
36725--37294
302
1.9
302
92
0
951
36
18
18
26
1.94
38130--38260
50
2.6
50
84
6
156
36
12
15
35
1.85
38462--38494
17
1.9
17
88
11
50
66
6
0
27
1.15
43352--43520
43
3.9
43
81
3
171
34
8
20
37
1.82
43705--43801
28
3.4
28
81
5
124
20
14
17
47
1.82
43705--43801
27
3.4
27
82
5
113
20
14
17
47
1.82
44239--44271
17
1.9
17
100
0
66
9
6
24
60
1.49
50623--50685
17
3.6
17
80
2
63
46
17
19
17
1.85
60023--60120
26
3.8
26
93
0
151
24
21
25
28
1.99
67022--67077
27
2.1
27
100
0
112
21
35
7
35
1.81
76130--76185
25
2.2
25
87
0
85
21
12
30
35
1.90
81112--81633
137
3.9
137
91
2
792
45
5
8
40
1.57
83074--83108
13
2.8
12
87
8
52
25
0
8
65
1.21
89065--89098
17
2.1
16
88
5
50
76
2
5
14
1.09
89098--89142
5
9.0
5
97
0
81
20
2
37
40
1.65
93564--93598
16
2.2
16
89
0
52
77
2
0
20
0.90
95395--95429
17
2.1
16
94
5
61
77
0
5
17
0.96
98086--98181
27
3.5
27
94
1
156
25
18
20
35
1.95
98171--98336
24
6.9
24
88
1
226
23
22
27
26
2.00
101916--102061
27
5.4
27
94
0
256
26
17
20
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102055--102140
24
3.6
24
82
6
120
20
22
27
29
1.99

Tables:   1

The End!