Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014547.1 Kokia drynarioides strain JFW-HI SEQ_129586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  121784

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2968--3000
16
2.1
16
88
5
50
51
0
0
48
1.00
7374--7416
22
2.0
20
82
8
50
48
9
0
41
1.35
7893--7957
29
2.2
30
78
8
71
55
6
12
26
1.60
8374--8437
31
2.1
30
82
2
74
54
6
4
34
1.46
20085--20118
2
17.5
2
93
6
61
50
0
0
50
1.00
20726--20770
19
2.3
20
79
17
51
75
6
2
15
1.11
21119--21147
7
4.1
7
100
0
58
55
0
44
0
0.99
22658--22752
29
3.2
29
75
10
95
43
11
14
30
1.81
32201--32275
31
2.4
31
82
4
80
46
13
12
28
1.78
43344--43414
31
2.3
31
83
11
92
61
5
1
30
1.27
43357--43425
31
2.2
31
89
0
102
63
5
1
28
1.26
57879--57995
60
2.0
60
98
0
225
29
9
14
47
1.76
65352--65433
43
1.9
43
100
0
164
34
25
9
30
1.88
65494--65785
58
5.1
57
76
8
202
30
17
13
38
1.88
66701--66749
19
2.7
19
76
17
59
59
0
4
36
1.17
66745--66836
30
3.1
30
87
0
130
61
3
6
28
1.36
76731--76759
6
4.8
6
100
0
58
51
48
0
0
1.00
79156--79187
12
2.7
12
90
0
55
6
68
15
9
1.36
80716--80756
21
2.0
21
85
0
55
39
0
19
41
1.52
89612--89653
8
4.8
9
83
13
52
66
2
0
30
1.04
91304--91347
14
2.9
15
80
16
54
50
0
0
50
1.00
98345--98389
19
2.3
19
80
3
54
48
4
8
37
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113455--113482
2
14.0
2
100
0
56
50
0
0
50
1.00
113533--113582
18
2.8
18
84
9
66
64
2
2
32
1.16
113533--113580
17
2.7
18
87
6
62
64
2
2
31
1.16
117436--117635
29
6.8
29
76
9
183
37
24
3
35
1.72
121039--121073
15
2.2
16
90
5
54
31
2
2
62
1.24

Tables:   1

The End!