Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014625.1 Kokia drynarioides strain JFW-HI SEQ_129664, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  378628

Tables:   1   2   

This is table  2  of  2  ( 163 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
296249--296283
17
2.2
17
90
10
56
48
0
5
45
1.26
296738--296769
14
2.3
14
100
0
64
28
0
46
25
1.53
299327--299351
13
1.9
13
100
0
50
24
0
4
72
1.02
300256--300290
17
2.0
18
88
5
54
22
0
0
77
0.78
300256--300288
9
3.7
9
92
8
50
21
0
0
78
0.75
300985--301027
14
3.1
14
83
6
52
65
0
0
34
0.93
301037--301083
23
2.1
22
96
4
85
55
4
10
29
1.53
313826--313961
23
6.0
23
90
1
195
13
21
21
43
1.87
316573--316614
2
21.0
2
100
0
84
50
0
0
50
1.00
319976--320027
21
2.5
21
81
6
61
32
0
1
65
1.04
319996--320042
16
2.9
16
72
15
51
29
0
2
68
1.02
322484--322528
23
2.0
21
87
8
63
20
2
2
75
1.01
334739--334802
17
3.8
17
87
0
92
43
0
3
53
1.16
334739--334805
6
11.7
6
72
15
52
44
0
2
52
1.16
335389--335470
3
27.3
3
75
14
62
58
0
6
35
1.23
335392--335469
24
3.2
25
75
13
83
57
0
6
35
1.24
335384--335473
30
3.0
31
75
9
96
56
1
6
35
1.33
336461--336747
29
9.8
29
80
9
282
37
27
3
32
1.73
336471--336785
30
10.8
28
80
9
133
37
26
3
32
1.73
336461--336777
116
2.7
117
82
8
335
36
26
3
32
1.74
336471--336785
29
10.8
28
80
7
204
37
26
3
32
1.73
337883--337935
23
2.3
23
80
3
63
54
1
1
41
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
338612--338654
17
2.5
17
78
17
52
32
0
2
65
1.06
340605--340658
17
3.1
18
84
7
76
40
0
3
55
1.17
340623--340688
28
2.3
28
84
2
87
43
1
1
53
1.19
340649--340692
18
2.5
18
92
3
72
50
2
0
47
1.13
341437--341524
30
2.9
30
81
3
97
57
0
1
40
1.06
341422--341516
3
30.7
3
78
6
64
54
0
1
44
1.07
342516--342699
30
6.2
29
84
7
192
36
31
2
29
1.69
342530--342712
60
3.1
59
84
6
235
38
32
2
27
1.69
342509--342699
89
2.1
89
83
7
244
38
30
2
28
1.69
343055--343240
96
1.9
97
86
7
263
29
20
15
35
1.93
344625--344916
52
5.6
52
92
0
458
34
22
14
28
1.93
348212--348272
32
1.9
32
89
0
95
49
16
6
27
1.70
352572--352610
18
2.2
18
86
4
53
48
5
17
28
1.68
360258--360285
9
3.1
9
100
0
56
42
0
32
25
1.55
360389--360916
262
2.0
262
100
0
1056
36
13
21
29
1.91
361344--361385
20
2.0
22
86
9
61
50
7
2
40
1.43
374762--374881
59
2.0
59
91
0
195
26
14
23
35
1.93
375296--375341
23
2.0
23
83
8
58
45
4
6
43
1.49
375428--375461
12
2.8
12
86
0
50
79
2
17
0
0.86
375971--375997
3
9.0
3
100
0
54
33
0
0
66
0.92
377660--377731
3
24.0
3
97
0
135
31
0
1
66
1.00

Tables:   1   2

The End!