Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014648.1 Kokia drynarioides strain JFW-HI SEQ_129687, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  363951

Tables:   1   2   

This is table  2  of  2  ( 157 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284388--284434
14
3.4
14
74
11
51
40
23
10
25
1.87
284395--284483
21
4.2
21
76
15
76
40
22
12
24
1.88
284396--284442
14
3.4
14
77
16
53
40
23
8
27
1.83
288871--288910
21
1.9
21
90
10
64
17
12
15
55
1.70
289116--289161
21
2.1
21
84
8
56
41
8
4
45
1.55
290031--290081
17
3.1
16
81
10
50
64
1
0
33
1.05
290047--290150
39
2.5
40
77
11
104
57
1
0
40
1.10
295564--295590
11
2.5
11
100
0
54
51
0
0
48
1.00
295749--295786
17
2.2
17
86
9
51
21
2
5
71
1.19
296049--296110
27
2.3
28
83
5
83
51
6
4
37
1.49
297463--297498
2
18.5
2
94
5
65
50
0
0
50
1.00
297523--297618
29
3.5
29
73
16
114
39
14
4
41
1.65
297516--297619
52
2.0
52
100
0
208
40
15
3
40
1.65
299934--300226
55
5.3
55
83
4
363
18
14
38
27
1.90
299938--300226
114
2.6
112
85
4
370
18
14
38
28
1.90
309871--309912
20
2.1
20
82
8
50
21
2
2
73
1.06
311446--311488
11
3.8
11
82
17
61
34
2
0
62
1.08
331736--331793
13
4.5
13
75
0
53
29
24
1
44
1.63
334062--334095
13
2.6
13
90
0
50
38
20
0
41
1.53
335352--335407
21
2.7
21
80
5
60
35
19
16
28
1.93
336145--336202
13
4.5
13
75
0
53
29
24
1
44
1.63
337044--337173
28
4.6
27
80
9
127
29
19
4
46
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
337100--337169
14
5.2
13
71
25
56
30
20
2
47
1.64
343267--343303
18
2.0
18
89
5
56
59
0
0
40
0.97
349237--349273
19
1.9
19
88
0
56
5
5
8
81
0.99
350675--350905
115
2.0
115
100
0
462
31
13
14
39
1.86
352710--352809
15
6.7
15
71
13
80
25
17
31
27
1.97
352710--352809
45
2.2
45
78
3
112
25
17
31
27
1.97
355246--355278
17
1.9
17
93
0
57
75
9
6
9
1.18
358721--358770
21
2.4
21
90
6
75
32
20
12
36
1.89
358763--358924
75
2.1
77
85
6
211
40
14
5
38
1.70
358901--358971
35
2.0
35
97
0
133
32
19
11
36
1.87
359868--359929
30
2.1
30
90
6
99
22
33
0
43
1.54
360215--360478
40
6.4
40
73
11
167
42
19
20
17
1.90
360247--360479
82
2.8
82
84
3
292
41
21
21
16
1.90
361511--361645
41
3.3
41
70
19
109
36
16
25
21
1.94
362433--362737
30
10.2
30
80
4
307
37
20
1
40
1.61

Tables:   1   2

The End!