Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014650.1 Kokia drynarioides strain JFW-HI SEQ_129689, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58975

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2391--2465
36
2.1
36
100
0
150
54
16
5
24
1.62
5354--5455
34
3.2
33
75
14
88
26
8
0
63
1.30
5367--5418
16
3.1
17
81
18
72
25
7
0
67
1.17
5388--5449
29
2.2
29
81
13
76
29
4
1
64
1.23
5461--5485
2
12.5
2
100
0
50
48
0
0
52
1.00
7062--7151
36
2.5
36
94
1
164
31
17
26
24
1.97
7906--7955
21
2.4
21
82
0
55
26
10
28
36
1.88
10056--10090
16
2.1
18
89
10
56
54
11
0
34
1.37
11703--11923
72
3.0
72
84
7
239
30
20
22
26
1.98
11790--11945
80
2.0
80
90
2
251
30
21
21
26
1.98
11771--11964
80
2.4
78
81
11
248
30
22
22
24
1.99
15194--15240
6
7.7
6
85
4
67
17
4
0
78
0.90
15195--15232
19
2.0
19
94
0
67
15
2
0
81
0.80
16839--16868
14
2.1
14
93
0
51
20
6
3
70
1.25
21329--21371
21
2.0
22
90
4
70
48
0
0
51
1.00
21332--21405
30
2.4
31
93
2
123
52
0
1
45
1.09
22455--22506
20
2.5
22
93
6
90
51
1
0
46
1.12
29532--29563
7
4.6
7
100
0
64
43
0
28
28
1.55
31269--31828
52
10.6
52
85
4
640
26
13
23
36
1.92
33898--33961
27
2.4
27
81
0
74
20
43
15
20
1.87
38000--38056
26
2.1
28
87
6
82
35
7
10
47
1.65
39194--39748
215
2.6
215
84
2
711
26
16
14
41
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39787--50285
216
48.9
216
82
3
11653
27
16
14
40
1.88
39787--52458
431
29.6
431
80
5
12547
27
16
14
40
1.88
50371--52458
214
9.7
216
81
5
2320
27
16
14
41
1.87
52304--52603
165
1.8
165
83
7
403
27
16
12
44
1.84
52469--53222
216
3.5
214
83
4
849
27
16
15
40
1.89
52900--53565
333
2.0
335
82
3
815
26
15
15
41
1.87
53235--58975
216
26.1
216
73
10
3709
27
16
14
40
1.88
53235--55072
215
8.5
216
83
3
2118
28
16
14
40
1.88
55075--58975
216
18.1
216
83
3
4551
27
17
14
40
1.88
55075--58975
431
9.1
432
82
3
4442
27
17
14
40
1.88

Tables:   1

The End!