Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014690.1 Kokia drynarioides strain JFW-HI SEQ_129729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  321489

Tables:   1   2   

This is table  2  of  2  ( 161 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
202928--202972
23
1.9
23
86
4
63
28
0
6
64
1.19
202930--202979
23
2.2
23
82
7
57
28
2
4
66
1.21
218288--218341
26
2.0
27
92
3
92
29
33
0
37
1.58
221795--221822
2
14.0
2
100
0
56
50
0
0
50
1.00
221970--222022
25
2.1
25
83
13
65
62
0
3
33
1.13
222978--223043
30
2.2
30
86
0
87
43
0
3
53
1.16
226748--226810
28
2.2
28
88
0
90
42
20
4
31
1.73
233689--233747
10
6.1
10
71
15
52
64
0
0
35
0.94
233755--233823
22
3.1
23
80
16
92
49
23
0
27
1.50
233872--233932
29
2.0
30
90
6
97
36
0
14
49
1.44
234390--234415
3
8.7
3
100
0
52
65
0
0
34
0.93
239137--239173
19
1.9
19
88
0
56
35
18
27
18
1.95
256325--256353
14
2.0
15
93
6
51
34
13
13
37
1.85
261688--261761
28
2.7
28
80
2
87
33
2
22
40
1.69
270198--270245
18
2.8
17
84
6
60
6
31
0
62
1.20
273843--273874
15
2.1
16
94
5
57
0
25
0
75
0.81
274522--274567
24
1.9
24
95
0
83
54
0
2
43
1.12
274896--274971
25
3.1
24
68
25
61
40
1
1
56
1.16
276023--276055
13
2.3
15
90
10
52
54
0
3
42
1.15
276093--276292
97
2.0
98
89
1
303
48
4
3
44
1.38
276117--276326
97
2.2
97
82
4
235
50
3
3
43
1.35
277224--277255
16
2.0
16
93
0
55
46
6
0
46
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
277987--278056
16
4.2
17
75
8
72
37
0
7
55
1.27
277984--278052
34
2.1
33
88
2
102
37
0
7
55
1.28
278261--278324
14
4.3
15
80
11
69
57
0
0
42
0.98
284050--284106
28
2.0
29
86
3
80
54
0
7
38
1.28
284063--284159
28
3.4
27
74
12
88
56
5
8
29
1.50
286758--286962
103
2.0
103
96
0
374
32
18
16
33
1.93
290524--290677
51
3.0
50
82
5
193
28
22
8
40
1.83
295965--296025
30
2.0
30
100
0
122
34
19
13
32
1.90
298765--298923
50
3.2
50
83
4
205
35
15
23
25
1.94
298763--298978
99
2.2
100
79
5
231
34
18
22
24
1.96
300104--300159
27
2.1
26
87
9
78
26
7
0
66
1.18
302981--303029
22
2.3
21
80
13
55
53
6
0
40
1.26
303912--304010
39
2.5
39
93
0
171
25
5
16
53
1.63
304056--304118
32
2.0
32
87
0
90
31
7
19
41
1.80
304511--304545
17
2.1
17
100
0
70
28
17
25
28
1.97
305636--305709
29
2.5
30
80
6
87
41
6
8
43
1.61
319101--319142
12
3.5
12
78
12
50
4
19
2
73
1.12
319093--319148
24
2.3
24
93
0
94
3
21
5
69
1.24
320739--320777
19
2.0
20
90
5
62
7
12
5
74
1.20

Tables:   1   2

The End!