genome.fa.s14704.2.7.7.80.10.50.1000.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014704.1 Kokia drynarioides strain JFW-HI SEQ_129743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20401

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
1--4361	216	20.2	216	79	5	4152	40	13	17	27	1.88
1--4361	431	10.1	429	80	5	3801	40	13	17	27	1.88
1--4361	647	6.7	648	78	5	4196	40	13	17	27	1.88
4377--4439	30	2.1	30	100	0	126	42	15	19	22	1.88
4407--9267	216	22.5	216	78	6	4216	40	14	17	27	1.88
4407--9267	651	7.5	646	78	7	4529	40	14	17	27	1.88
9258--11587	215	10.8	216	80	6	2178	39	14	18	27	1.89
9258--11587	431	5.4	430	79	6	2179	39	14	18	27	1.89
9258--11587	862	2.7	853	81	5	2602	39	14	18	27	1.89
11612--15476	216	17.9	215	77	6	3381	40	14	17	27	1.89
11612--15496	868	4.5	864	78	5	3878	40	14	17	27	1.89
14607--14650	19	2.3	19	100	0	88	43	13	15	27	1.85
11612--15496	431	9.0	428	77	7	3338	40	14	17	27	1.89
15161--15867	373	1.9	372	83	4	933	40	14	18	27	1.89
15529--20390	216	22.6	215	77	6	4131	40	14	17	27	1.89
15529--20390	431	11.3	430	77	7	4154	40	14	17	27	1.89

Tables:   1

The End!