Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014734.1 Kokia drynarioides strain JFW-HI SEQ_129773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  222657

Tables:   1   2   

This is table  2  of  2  ( 145 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187840--188183
151
2.3
153
80
7
341
37
21
25
16
1.93
188605--188747
39
3.7
39
73
5
128
24
27
21
26
1.99
188554--188826
78
3.5
78
83
4
327
25
28
19
27
1.99
189279--189351
6
13.2
6
67
16
50
41
0
5
53
1.24
189272--189351
16
5.2
16
72
17
80
41
0
5
53
1.22
189235--189333
27
3.6
29
81
9
100
35
2
7
55
1.39
189280--189362
17
5.4
17
68
26
67
39
0
7
53
1.29
189272--189380
27
3.4
33
73
17
104
42
0
6
50
1.34
189287--189348
27
2.3
27
100
0
124
37
0
6
56
1.25
191516--191703
29
6.3
29
74
13
134
30
25
3
40
1.73
191386--191703
30
10.7
30
71
13
149
32
24
3
38
1.73
197283--197327
22
2.0
22
86
8
63
33
4
8
53
1.52
198347--198390
19
2.3
20
84
7
56
79
4
6
9
1.04
200352--200378
6
4.5
6
100
0
54
0
14
18
66
1.25
201354--201430
34
2.3
34
95
0
136
24
25
19
29
1.98
203439--203466
13
2.2
13
100
0
56
35
0
14
50
1.43
210808--210906
36
2.7
36
85
1
126
40
17
23
19
1.91
212202--212373
23
7.7
23
73
16
130
13
21
19
45
1.84
212222--212320
48
2.1
45
85
9
128
11
23
22
43
1.85
212321--212388
23
3.0
22
74
6
64
13
22
17
47
1.82
216530--216788
116
2.2
114
85
2
338
25
10
26
37
1.88
218138--218210
34
2.1
35
84
2
94
26
17
9
46
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
221217--221361
62
2.3
62
88
7
202
40
23
2
34
1.66
221267--221369
34
3.2
33
77
14
117
38
26
2
32
1.71
221621--221662
21
2.0
20
86
4
57
30
28
9
30
1.89

Tables:   1   2

The End!