Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014745.1 Kokia drynarioides strain JFW-HI SEQ_129784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  532331

Tables:   1   2   

This is table  2  of  2  ( 171 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
421494--421573
23
3.4
23
89
3
115
13
30
20
36
1.91
423625--423873
52
4.8
52
87
3
322
34
22
13
29
1.92
430125--430182
21
2.8
21
84
5
73
29
22
13
34
1.93
430168--430220
21
2.5
21
84
0
79
30
24
15
30
1.95
430853--431045
52
3.7
52
86
0
242
34
23
13
27
1.93
433972--434210
52
4.6
52
74
9
218
25
14
23
35
1.93
433972--434210
104
2.3
103
81
4
275
25
14
23
35
1.93
435089--435129
21
2.0
21
90
0
64
29
24
17
29
1.97
436143--436197
27
2.0
27
100
0
110
45
21
0
32
1.52
437705--437835
60
2.2
60
87
0
181
22
18
14
45
1.85
438060--438178
32
3.9
31
76
19
133
48
9
16
25
1.76
437990--438178
92
2.1
90
81
7
213
46
12
16
25
1.81
441293--441334
22
1.9
22
85
9
59
50
0
2
47
1.14
444235--444273
18
2.1
19
85
4
53
43
0
5
51
1.24
447066--447126
22
2.9
22
81
15
67
34
0
8
57
1.29
447169--447288
64
2.0
63
81
8
149
47
5
10
37
1.59
447558--447582
6
4.2
6
100
0
50
52
16
0
32
1.44
458959--458989
16
1.9
16
93
0
53
48
0
0
51
1.00
459103--459136
13
2.5
13
90
4
50
76
2
2
17
1.04
460131--460236
49
2.2
47
85
5
142
32
10
13
44
1.77
460346--460388
21
2.1
20
82
4
50
41
6
0
51
1.29
461477--461520
20
2.2
20
84
12
54
27
0
6
65
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
461735--461785
21
2.4
21
83
0
75
31
5
9
52
1.58
461960--462002
16
2.7
15
89
7
59
39
18
6
34
1.78
463330--463377
24
2.0
25
87
4
71
43
0
10
45
1.38
482715--482754
22
1.9
20
85
10
53
52
17
10
20
1.72
486065--486108
21
2.1
21
87
8
63
29
18
25
27
1.98
490302--490393
9
10.2
9
72
21
61
19
1
6
72
1.12
492522--492557
12
3.0
12
83
0
54
47
19
11
22
1.80
496528--496857
51
6.6
50
68
13
133
38
19
16
25
1.92
496500--496912
101
4.1
100
76
6
282
38
18
17
25
1.93
496540--496927
200
1.9
200
86
3
548
37
18
18
25
1.93
498954--499061
4
25.0
4
68
17
56
21
2
7
68
1.27
498954--499061
9
12.5
8
69
17
56
21
2
7
68
1.27
499197--499261
23
2.8
23
74
23
73
24
6
4
64
1.36
502410--502441
2
15.5
2
93
6
55
46
50
0
3
1.17
503773--503803
3
10.3
3
100
0
62
67
0
0
32
0.91
504237--504307
28
2.5
29
73
11
76
64
2
0
32
1.08
510540--510586
24
1.9
25
86
4
69
6
17
0
76
0.98
513761--513792
2
16.0
2
100
0
64
50
0
50
0
1.00
514075--514119
15
2.8
17
77
16
51
53
2
8
35
1.45
516553--516591
17
2.2
17
86
4
51
33
5
2
58
1.33
516948--516987
18
2.3
18
82
4
55
40
0
2
57
1.12
516837--517016
95
1.9
95
84
2
245
32
7
8
51
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
523508--523555
23
2.1
23
84
7
62
62
2
14
20
1.42
525425--525470
17
2.6
18
82
6
58
26
8
4
60
1.44
526016--526047
2
16.0
2
100
0
64
50
0
50
0
1.00
526330--526374
15
2.8
17
77
16
51
53
2
8
35
1.45
528808--528846
17
2.2
17
86
4
51
33
5
2
58
1.33
529203--529242
18
2.3
18
82
4
55
40
0
2
57
1.12
529092--529271
95
1.9
95
84
2
245
32
7
8
51
1.62

Tables:   1   2

The End!