Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014806.1 Kokia drynarioides strain JFW-HI SEQ_129848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  395033

Tables:   1   2   

This is table  2  of  2  ( 160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
322091--322164
5
15.0
5
75
8
71
36
5
20
37
1.76
322122--322175
24
2.2
25
83
3
65
35
5
22
37
1.77
326575--326616
17
2.4
18
84
4
50
47
11
4
35
1.61
328102--328140
18
2.2
18
85
0
51
64
17
5
12
1.46
328120--328153
15
2.3
15
89
0
50
58
11
5
23
1.55
329815--329850
15
2.4
15
85
0
54
55
13
5
25
1.60
331134--331173
17
2.2
17
86
8
53
45
12
5
37
1.64
331175--331200
10
2.6
10
100
0
52
84
7
0
7
0.77
332686--332722
18
2.0
19
89
5
58
64
13
5
16
1.45
334654--334789
36
3.8
36
90
0
209
27
12
25
34
1.92
335188--335574
23
16.8
23
83
8
450
34
4
16
43
1.69
347942--347980
19
2.1
19
100
0
78
20
0
20
58
1.39
349287--349639
105
3.4
105
84
2
440
37
14
15
32
1.88
354677--354733
26
2.2
26
93
0
96
33
21
14
31
1.92
358658--358942
52
5.5
52
88
0
392
27
15
23
34
1.94
362795--362835
14
3.0
14
89
3
57
82
0
17
0
0.66
362797--362834
10
3.6
11
86
10
53
84
0
15
0
0.63
363523--363650
57
2.2
58
88
5
188
24
5
7
63
1.41
363523--363650
56
2.2
56
87
8
177
24
5
7
63
1.41
363626--363650
13
1.9
13
100
0
50
32
0
4
64
1.12
363547--363666
57
2.2
55
82
5
152
28
5
6
60
1.43
364978--365017
22
1.9
20
85
10
53
42
12
0
45
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365098--365122
7
3.6
7
100
0
50
32
0
12
56
1.36
364803--365207
204
2.0
195
94
4
668
35
7
5
51
1.54
365986--366046
30
2.0
32
83
6
81
39
4
13
42
1.65
367152--367228
37
2.0
37
82
5
91
53
5
23
18
1.64
367536--367582
24
2.0
24
91
4
78
57
0
2
40
1.11
367549--367582
12
2.8
12
86
0
50
55
0
0
44
0.99
374583--374630
19
2.5
20
86
3
62
43
0
10
45
1.38
374644--374695
26
2.0
26
92
0
86
46
7
3
42
1.51
375486--375556
22
3.2
22
79
15
92
19
30
11
38
1.87
375486--375579
44
2.1
44
90
3
145
19
29
12
38
1.89
375486--375579
22
4.3
22
75
18
81
19
29
12
38
1.89
375549--375598
22
2.3
22
85
0
64
20
26
16
38
1.92
375562--375611
22
2.3
22
79
6
57
18
26
18
38
1.93
379578--379633
23
2.4
24
90
3
96
21
14
10
53
1.70
381386--381418
15
2.1
16
88
5
50
63
0
27
9
1.24
384927--384979
23
2.3
23
74
3
54
50
1
5
41
1.36
385326--385356
6
5.2
6
92
0
53
45
0
3
51
1.17
385326--385394
18
3.7
18
76
12
68
40
1
13
44
1.52

Tables:   1   2

The End!