Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014837.1 Kokia drynarioides strain JFW-HI SEQ_129879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  138691

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1534--1580
12
3.9
12
78
10
51
25
57
6
10
1.56
1745--1836
27
3.4
27
71
21
84
25
59
6
8
1.51
1750--1837
24
3.4
24
70
22
79
26
59
5
9
1.50
10678--10722
20
2.3
20
84
3
56
48
4
0
46
1.22
27597--27629
16
2.0
17
94
5
59
57
6
6
30
1.47
27675--27746
34
2.1
34
100
0
144
55
8
11
25
1.62
31722--31760
16
2.4
16
86
4
51
35
2
2
58
1.25
50290--50317
11
2.5
11
100
0
56
53
0
0
46
1.00
56082--56127
23
2.0
23
84
12
60
47
10
0
41
1.38
57469--57494
12
2.2
12
100
0
52
15
7
61
15
1.55
59610--59756
59
2.5
60
73
10
142
51
12
12
23
1.73
60105--60139
16
2.2
16
100
0
70
40
25
11
22
1.88
61913--61952
20
2.0
20
90
0
62
32
17
0
50
1.47
64654--64687
16
2.1
16
88
5
50
38
0
0
61
0.96
74333--74401
31
2.4
27
79
13
84
37
10
11
40
1.75
74336--74394
31
2.0
31
86
6
86
35
10
11
42
1.76
84978--85004
3
9.0
3
100
0
54
66
0
0
33
0.92
85080--85128
19
2.6
18
81
12
53
10
6
8
75
1.18
85093--85129
19
2.0
20
89
10
60
8
5
8
78
1.09
85093--85129
18
2.0
19
89
5
58
8
5
8
78
1.09
98344--98374
16
1.9
16
93
0
53
61
0
3
35
1.12
98697--98923
123
1.8
124
82
6
291
28
9
14
48
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98940--99853
126
7.2
127
81
4
982
27
10
14
47
1.77
98934--99831
254
3.5
253
81
6
1031
27
10
14
47
1.77
98940--99853
128
7.2
127
81
5
970
27
10
14
47
1.77
101272--102458
199
5.9
199
80
5
1213
28
19
21
30
1.98
104399--104472
36
2.1
36
100
0
148
40
21
2
35
1.68
116618--116644
3
9.0
3
100
0
54
66
0
0
33
0.92
116510--116779
135
2.0
135
97
0
504
39
12
9
38
1.76
116753--116788
3
12.0
3
100
0
72
66
0
0
33
0.92
121244--121284
19
2.1
20
82
13
50
65
0
4
29
1.13
129263--129308
17
2.7
17
87
9
67
54
8
0
36
1.32
130211--130315
55
1.9
55
100
0
210
45
8
6
39
1.61

Tables:   1

The End!