Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014896.1 Kokia drynarioides strain JFW-HI SEQ_129939, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  156904

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2689--2731
11
3.9
11
78
0
50
62
6
9
20
1.48
3798--3830
18
1.9
17
88
11
50
72
0
12
15
1.12
9615--9657
22
2.0
22
90
0
68
11
11
13
62
1.54
9617--9665
22
2.2
22
85
0
62
14
10
14
61
1.57
13612--13667
26
2.2
26
80
6
60
39
5
3
51
1.42
16928--16990
29
2.1
31
82
11
78
50
9
4
34
1.56
23727--23756
12
2.6
11
90
10
51
0
0
10
90
0.47
27869--27901
17
1.9
17
88
11
50
54
9
0
36
1.32
30233--30272
15
2.6
14
85
14
53
67
7
5
20
1.34
31696--32184
266
1.8
264
90
1
791
35
10
9
44
1.70
43432--43503
31
2.4
30
81
9
85
25
15
9
50
1.74
46956--47069
59
1.9
59
100
0
228
45
32
10
11
1.74
51405--52138
253
2.9
253
83
5
858
42
14
17
25
1.87
51405--52142
127
5.9
127
82
6
815
42
13
17
26
1.87
52070--52247
96
1.8
97
90
3
288
42
11
20
25
1.85
51937--52357
219
1.9
222
87
2
625
44
13
17
24
1.85
52157--52550
127
3.2
123
84
5
540
41
14
17
26
1.88
57580--57632
27
1.9
27
85
11
72
22
5
26
45
1.74
61150--61179
13
2.2
14
94
5
53
10
6
0
83
0.81
65550--65591
20
2.0
21
86
13
61
64
2
0
33
1.07
65702--65776
20
3.9
20
75
11
77
30
4
4
61
1.33
79751--79780
15
1.9
16
93
6
53
53
0
3
43
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79742--79782
16
2.6
16
78
17
50
58
0
2
39
1.11
80443--80495
24
2.2
25
82
3
63
64
1
0
33
1.05
81045--81106
19
3.2
19
70
17
63
40
6
6
46
1.55
81056--81115
21
3.0
21
67
18
54
38
5
11
45
1.63
81035--81115
40
2.0
40
97
0
153
38
4
8
48
1.56
92405--92448
3
14.7
3
100
0
88
65
0
34
0
0.93
98751--98799
21
2.3
20
76
10
53
36
32
2
28
1.69
99728--99773
21
2.1
21
84
8
56
41
8
4
45
1.55
100439--100475
3
12.3
3
100
0
74
0
32
0
67
0.91
101559--101641
35
2.4
34
84
4
114
32
19
15
32
1.93
101563--101622
33
1.9
30
83
12
77
26
18
18
36
1.94
120829--120878
24
2.1
24
85
7
66
42
4
2
52
1.31
121099--121154
29
1.9
29
85
7
78
46
8
17
26
1.78
139150--139192
22
1.9
22
85
4
59
37
4
0
58
1.19
144731--144773
21
2.0
21
82
8
52
60
6
0
32
1.23
146082--146149
28
2.4
27
79
16
68
11
13
2
72
1.24
146468--146522
9
5.7
9
77
14
56
63
0
1
34
1.05
146484--146524
20
2.0
21
95
4
75
63
0
0
36
0.95
146468--146526
10
6.0
10
75
11
59
62
0
1
35
1.05
147062--147091
15
2.0
15
93
0
51
16
6
0
76
0.99

Tables:   1

The End!