Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014927.1 Kokia drynarioides strain JFW-HI SEQ_129970, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  457488

Tables:   1   2   

This is table  2  of  2  ( 166 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
353042--353089
21
2.3
21
85
7
62
37
0
2
60
1.09
355437--355470
13
2.8
12
86
8
50
52
2
14
29
1.56
358499--358720
9
22.5
10
69
20
80
32
2
3
60
1.28
358489--358719
20
12.2
19
69
18
110
32
2
3
61
1.28
358632--358704
29
2.6
28
81
12
78
32
0
4
63
1.14
358668--358719
19
2.7
19
88
8
70
32
1
5
59
1.32
358489--358699
10
21.3
10
71
15
84
31
2
3
62
1.24
365718--365794
29
2.7
29
87
0
100
28
7
11
51
1.66
369906--369940
18
1.9
18
88
0
52
45
2
0
51
1.16
380233--380270
20
2.0
20
84
5
51
21
2
10
65
1.35
381043--381106
32
2.0
31
84
9
83
50
4
1
43
1.32
381089--381120
14
2.1
16
88
11
50
59
6
0
34
1.23
384185--384218
6
5.7
6
96
0
50
23
0
50
26
1.50
391295--391324
15
2.0
15
93
0
51
36
0
33
30
1.58
392961--393026
30
2.2
29
81
10
80
27
15
25
31
1.95
392962--393131
66
2.6
66
86
0
234
28
14
28
28
1.95
394803--394836
18
1.9
18
94
5
61
44
0
11
44
1.40
407812--407848
14
2.6
15
83
12
51
51
0
0
48
1.00
408455--408508
27
1.9
29
92
7
94
61
11
7
20
1.53
413376--413406
15
2.1
15
93
0
53
35
3
19
41
1.67
413361--413409
18
2.7
18
77
0
62
40
2
22
34
1.66
413454--413488
18
1.9
18
94
0
61
65
0
25
8
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
414135--414170
14
2.6
14
90
0
54
27
0
5
66
1.13
414466--414508
8
5.7
7
84
10
50
55
2
0
41
1.12
417270--417297
6
4.7
6
100
0
56
0
14
67
17
1.22
421127--421173
18
2.8
17
81
15
53
21
2
8
68
1.27
423112--423248
72
1.9
72
95
0
247
35
8
9
46
1.66
427428--427453
13
2.0
13
100
0
52
69
0
15
15
1.20
430007--430047
21
2.0
21
90
0
64
36
26
14
21
1.93
437509--437541
7
4.7
7
100
0
66
27
0
0
72
0.85
439026--439068
19
2.3
19
84
4
61
58
0
11
30
1.34
439910--439949
18
2.2
18
86
8
55
50
2
2
45
1.28
439910--439949
19
2.2
18
86
4
53
50
2
2
45
1.28
439824--440084
131
2.0
130
81
12
302
42
6
3
47
1.44
440001--440246
132
1.9
132
88
4
379
45
7
3
43
1.49
440254--440301
19
2.6
18
77
6
51
39
12
2
45
1.54
440171--440371
108
1.9
108
89
2
314
43
8
1
46
1.43
446836--446883
11
4.3
11
80
15
53
64
0
2
33
1.05
448345--448413
34
2.0
34
100
0
138
30
40
8
20
1.82
452775--453397
61
10.6
59
70
16
323
26
16
14
42
1.87
452783--452953
59
2.8
60
78
11
172
28
16
11
43
1.83
453047--453367
116
2.7
117
83
6
384
22
17
17
42
1.88
452960--453398
178
2.4
178
75
13
400
27
16
14
41
1.87
452955--453384
118
3.6
114
78
7
362
25
16
15
42
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
457280--457310
11
2.7
12
90
10
55
54
0
6
38
1.26
457395--457432
11
3.5
11
85
7
51
50
2
0
47
1.15

Tables:   1   2

The End!