Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015001.1 Kokia drynarioides strain JFW-HI SEQ_130045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  675174

Tables:   1   2   

This is table  2  of  2  ( 164 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
468792--468829
17
2.2
18
85
4
51
63
0
2
34
1.09
468811--468840
12
2.6
12
94
5
53
73
0
0
26
0.84
473711--473751
21
1.9
22
85
5
57
34
0
4
60
1.18
485698--485745
15
3.2
14
82
11
51
60
2
2
35
1.20
485705--485755
15
3.4
14
84
10
66
56
1
0
41
1.10
486069--486119
15
3.4
14
84
10
66
56
1
0
41
1.10
486448--486489
15
2.9
15
89
3
59
57
2
0
40
1.12
485579--486600
364
2.8
368
91
4
1635
42
8
9
38
1.68
489860--489917
14
4.4
14
65
12
50
39
12
15
32
1.84
491721--491745
2
12.5
2
100
0
50
52
0
0
48
1.00
513933--513977
22
2.0
23
82
8
56
28
0
15
55
1.41
514920--515018
33
3.1
32
81
4
119
37
16
11
35
1.84
515406--515460
27
2.0
28
82
10
69
30
5
3
60
1.37
524919--524960
21
1.9
22
85
9
59
59
0
11
28
1.33
525000--525029
3
10.3
3
92
7
53
70
0
0
30
0.88
537520--537544
5
5.0
5
100
0
50
60
40
0
0
0.97
545188--545234
20
2.3
21
79
17
55
48
4
2
44
1.34
548983--549038
20
2.9
19
76
12
60
66
3
3
26
1.25
566381--566406
13
2.0
13
100
0
52
38
0
0
61
0.96
569038--569151
48
2.4
48
82
2
140
39
20
27
13
1.89
569045--569151
23
4.4
25
80
9
107
39
20
28
12
1.88
573919--573986
16
4.1
17
74
10
61
25
0
2
72
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
573911--573977
8
8.0
9
77
12
54
29
0
2
67
1.06
573926--573986
25
2.4
25
80
0
77
24
0
3
72
1.00
579818--579859
16
2.7
16
77
3
50
30
9
2
57
1.44
585879--585957
40
2.0
39
92
0
122
12
8
20
56
1.62
592535--592566
6
5.3
6
92
0
55
0
50
15
34
1.45
600668--600692
5
5.0
5
100
0
50
0
20
0
80
0.72
604681--604865
95
1.9
95
88
0
280
47
8
20
24
1.78
604834--604928
46
2.1
46
100
0
190
43
10
21
25
1.84
607450--607589
71
2.0
70
98
1
264
20
15
17
46
1.83
608641--608683
16
2.6
16
77
3
50
60
0
0
39
0.97
609455--609495
20
2.0
20
100
0
82
34
14
14
36
1.87
613708--613759
19
2.7
18
74
11
50
67
0
5
26
1.13
614244--614291
20
2.4
21
86
10
66
41
2
0
56
1.11
617679--617705
6
4.5
6
100
0
54
0
33
51
14
1.43
638783--638815
2
16.5
2
100
0
66
48
0
0
51
1.00
641680--641758
35
2.3
34
77
14
81
40
6
3
49
1.46
658242--658678
217
2.0
218
86
3
621
31
12
10
45
1.75
664771--664826
23
2.5
23
94
2
96
12
21
28
37
1.90
664846--664898
22
2.4
22
96
0
97
22
18
13
45
1.84
667399--667452
26
2.1
26
100
0
108
37
11
7
44
1.68
668917--668957
18
2.1
21
86
13
61
51
7
12
29
1.66
671491--671523
7
4.7
7
100
0
66
42
0
42
15
1.46

Tables:   1   2

The End!