Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015042.1 Kokia drynarioides strain JFW-HI SEQ_130086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  366595

Tables:   1   2   

This is table  2  of  2  ( 149 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301267--301319
26
2.1
26
86
10
74
33
5
9
50
1.58
304628--304808
91
2.0
91
97
0
344
36
15
14
33
1.88
311075--311113
19
2.1
19
95
0
69
35
17
20
25
1.95
311507--311610
44
2.4
44
81
3
111
68
14
4
12
1.36
311507--311586
20
3.8
20
78
12
79
68
17
2
11
1.30
311621--311686
34
2.0
34
87
3
98
65
15
7
12
1.47
315847--315907
32
1.9
32
86
0
86
27
9
8
54
1.62
317573--317621
23
2.1
23
82
14
57
28
24
0
46
1.53
336993--337029
19
2.0
20
84
10
51
43
18
0
37
1.51
337050--337082
12
2.5
13
90
9
50
33
12
6
48
1.65
337443--337523
29
2.8
29
73
14
85
49
1
3
45
1.27
339530--339592
9
7.2
9
70
13
51
26
1
1
69
1.06
339566--339610
21
2.1
21
83
0
54
31
4
0
64
1.13
342289--342323
15
2.3
15
90
0
52
34
2
0
62
1.10
342876--342931
24
2.3
24
93
0
103
57
7
10
25
1.58
342876--342939
24
2.7
24
87
4
85
56
6
9
28
1.55
344861--344921
24
2.5
24
81
0
68
52
8
11
27
1.66
346383--346428
23
2.0
23
100
0
92
47
8
13
30
1.72
347641--347674
17
2.1
16
88
5
50
29
0
0
70
0.87
347870--347916
24
2.0
25
91
8
80
31
2
0
65
1.04
347953--347988
19
1.9
18
88
5
54
44
0
2
52
1.15
347977--348006
14
2.1
14
93
0
51
56
0
0
43
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
353659--353816
60
2.7
58
81
14
148
62
1
6
29
1.30
353682--353851
20
8.7
19
68
15
89
62
2
7
27
1.33
354005--354069
21
3.2
19
75
16
51
27
3
4
64
1.28
354028--354088
29
2.1
28
81
3
68
31
3
4
60
1.34
354027--354141
9
12.8
9
66
20
62
33
3
2
60
1.27
362394--362418
5
5.0
5
100
0
50
20
0
0
80
0.72
362810--362851
20
2.0
21
90
4
68
23
40
0
35
1.55

Tables:   1   2

The End!