Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015066.1 Kokia drynarioides strain JFW-HI SEQ_130110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  364676

Tables:   1   2   

This is table  2  of  2  ( 170 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
271392--271530
57
2.4
56
85
5
190
52
2
0
45
1.12
271526--271576
24
2.1
24
82
10
59
56
0
5
37
1.23
276169--276261
14
6.6
14
70
0
60
43
26
2
27
1.67
276126--276209
28
3.0
27
79
6
69
38
30
4
26
1.77
276183--276232
21
2.4
20
83
9
64
42
22
4
32
1.72
276223--276270
21
2.3
20
89
10
78
45
25
0
29
1.53
276169--276261
28
3.3
27
79
5
87
43
26
2
27
1.67
277876--277945
29
2.4
29
81
11
72
30
1
2
65
1.15
279552--279584
15
2.3
15
89
5
50
66
0
0
33
0.92
287216--287261
24
1.9
24
90
0
74
41
17
13
28
1.86
287717--287756
19
2.1
19
100
0
80
42
0
15
42
1.46
289390--289440
21
2.4
21
83
6
59
29
25
19
25
1.99
291273--291322
20
2.5
20
80
9
57
40
16
0
44
1.47
292888--292922
18
1.9
18
100
0
70
34
8
0
57
1.29
295427--295471
3
16.0
3
82
13
51
33
4
0
62
1.15
295479--295517
20
1.9
21
94
5
71
61
5
7
25
1.44
301246--301302
20
2.8
20
81
7
62
19
5
26
49
1.69
302176--302221
20
2.2
20
84
7
56
28
4
8
58
1.47
303171--303237
34
1.9
35
85
8
93
44
2
2
49
1.32
308583--308706
52
2.4
51
83
1
158
32
32
16
18
1.94
308569--308706
26
5.3
26
76
8
129
31
31
16
20
1.95
311916--311941
2
13.0
2
100
0
52
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
315345--315379
17
2.1
17
100
0
70
8
11
17
62
1.52
316264--316312
25
2.0
25
87
0
71
18
22
26
32
1.97
318019--318059
13
3.2
13
89
0
55
19
19
17
43
1.88
322330--322368
18
2.2
18
95
0
69
23
35
20
20
1.96
326605--326679
25
3.0
25
92
0
132
17
14
30
37
1.90
334572--334604
17
2.0
17
94
5
59
60
0
0
39
0.97
335255--335292
18
2.2
18
90
4
60
57
0
0
42
0.98
342684--342723
21
1.9
21
89
0
62
27
20
12
40
1.88
344274--344313
21
1.9
21
89
0
62
75
2
7
15
1.14
349973--350020
20
2.5
18
74
12
51
29
8
2
60
1.37
350017--350152
10
15.5
8
74
18
62
35
0
2
61
1.11
350033--350111
27
2.8
27
80
14
72
35
0
5
59
1.19
350016--350129
19
6.2
17
70
17
68
34
0
3
62
1.12
350045--350122
10
8.2
10
78
5
74
33
0
3
62
1.13
350755--350789
2
17.5
2
100
0
70
51
0
0
48
1.00
354561--354593
16
2.0
17
94
5
59
18
3
0
78
0.87
354891--355083
10
19.4
10
66
16
53
27
6
2
63
1.32
354885--354978
19
4.8
19
70
19
68
30
6
1
61
1.28
354871--355062
50
3.9
48
76
11
140
30
4
3
61
1.31
354933--354991
28
2.1
28
80
0
64
23
8
3
64
1.37
354998--355066
20
3.5
20
75
15
72
34
1
2
60
1.20
355019--355091
20
3.7
20
78
8
69
30
4
1
64
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
355019--355091
10
7.4
9
76
10
56
30
4
1
64
1.20
355167--355251
30
2.8
30
78
8
91
28
3
1
67
1.15
355206--355260
21
2.7
21
82
2
58
23
1
3
70
1.12
355552--355612
22
2.9
21
81
13
63
73
1
8
16
1.14
356409--356451
19
2.3
19
84
8
52
58
4
0
37
1.19
364610--364663
25
2.2
24
87
6
81
57
1
0
40
1.09

Tables:   1   2

The End!