Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015115.1 Kokia drynarioides strain JFW-HI SEQ_130159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  273921

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
888--928
20
2.2
19
86
8
57
43
0
9
46
1.36
4687--4730
13
3.2
13
78
12
52
36
2
0
61
1.09
6978--7015
3
12.7
3
100
0
76
0
0
31
68
0.90
7830--7859
3
10.0
3
92
0
51
0
36
0
63
0.95
17930--17980
26
1.9
27
84
4
68
43
1
0
54
1.11
25937--25969
13
2.6
13
90
4
50
36
6
12
45
1.66
32385--32668
146
1.9
148
94
1
509
47
7
23
21
1.75
34081--34158
26
3.0
26
74
12
70
65
1
5
28
1.22
35483--35533
26
2.0
25
85
11
68
64
5
1
27
1.27
57483--57528
14
3.3
14
84
6
58
58
0
2
39
1.10
70013--70038
2
13.0
2
100
0
52
50
0
0
50
1.00
85370--85437
31
2.3
30
84
5
93
50
13
4
32
1.61
91572--91638
29
2.2
29
84
10
82
32
8
11
46
1.72
91593--91651
29
2.0
29
86
3
82
32
5
11
50
1.61
92243--92283
6
6.8
6
100
0
82
31
51
0
17
1.46
96794--96818
2
12.5
2
100
0
50
48
0
0
52
1.00
116612--116663
27
2.0
26
84
3
68
23
13
36
26
1.92
116827--116862
11
3.2
11
88
4
54
77
0
22
0
0.76
116860--116889
16
1.9
15
93
6
51
50
0
50
0
1.00
121580--121612
13
2.4
14
90
5
50
48
3
3
45
1.33
122394--122431
13
2.8
13
85
14
51
39
0
0
60
0.97
141584--141628
3
15.0
3
100
0
90
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
146323--146375
21
2.5
21
96
0
97
20
49
9
20
1.77
150674--150703
3
10.0
3
100
0
60
33
0
0
66
0.92
154958--155073
58
2.0
58
91
0
187
46
18
0
34
1.55
159325--159363
21
1.9
21
89
5
62
71
5
0
23
1.05
165386--165458
24
3.0
23
70
7
56
52
0
2
45
1.15
166479--166506
2
14.0
2
100
0
56
50
0
0
50
1.00
172656--172687
3
10.7
3
100
0
64
34
0
0
65
0.93
173203--173295
28
3.3
27
73
11
87
27
5
8
58
1.50
173199--173298
30
3.4
30
75
18
102
30
5
8
57
1.49
173238--173303
28
2.4
26
79
16
71
27
6
7
59
1.49
187133--187175
22
2.0
22
85
0
59
58
11
11
18
1.63
189188--189258
12
6.4
11
75
14
65
70
19
2
7
1.23
189276--189328
22
2.4
22
81
6
63
66
18
5
9
1.41
194012--194048
6
6.2
6
87
0
56
35
0
48
16
1.46
196917--196942
6
4.3
6
100
0
52
0
0
50
50
1.00
226766--226803
15
2.5
15
95
0
67
28
23
21
26
1.99
232846--232899
22
2.5
21
82
11
56
3
5
14
75
1.12
265930--266105
60
3.0
58
75
15
184
27
17
19
35
1.94
266118--266252
59
2.3
60
83
7
163
36
14
11
37
1.83
266127--266471
61
5.8
61
78
8
325
30
17
15
35
1.91
266168--266471
123
2.6
116
83
7
344
29
18
16
35
1.93
267125--267516
196
2.0
196
99
0
775
40
6
9
43
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
267531--267597
31
2.1
33
86
5
93
65
2
7
23
1.32
267547--267639
30
3.1
30
82
4
89
63
4
5
26
1.35
269827--270023
84
2.3
83
86
6
254
47
4
6
42
1.47
270153--270200
12
3.7
12
77
20
51
41
10
0
47
1.37
270163--270197
17
2.1
16
89
5
52
48
8
0
42
1.33
270153--270210
28
2.1
28
83
0
71
43
12
0
44
1.41

Tables:   1

The End!