Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015119.1 Kokia drynarioides strain JFW-HI SEQ_130163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  310394

Tables:   1   2   

This is table  2  of  2  ( 159 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
259711--259750
21
2.0
21
85
9
57
57
2
0
40
1.12
261955--262097
30
4.8
28
77
12
108
43
1
20
34
1.61
261979--262098
30
4.0
30
86
2
177
42
0
20
35
1.58
261980--262098
61
2.0
60
89
1
184
42
0
21
36
1.59
263166--263190
13
1.9
13
100
0
50
8
0
8
84
0.79
264224--264642
49
8.6
49
72
9
316
17
26
18
37
1.93
264172--264639
98
4.8
98
88
0
659
17
26
18
37
1.93
265096--265129
17
2.0
17
88
0
50
38
17
26
17
1.92
266316--266392
37
2.1
37
92
0
127
32
22
19
25
1.97
266466--266507
15
2.5
17
81
14
52
0
23
0
76
0.79
266473--266506
17
1.9
17
88
5
50
0
26
0
73
0.83
266616--266651
18
1.9
18
88
5
54
11
5
2
80
0.98
267033--267067
17
2.0
18
88
5
54
62
8
11
17
1.52
270792--270986
30
6.5
30
83
3
214
41
1
20
36
1.62
271493--271537
2
23.0
2
93
4
74
0
46
0
53
1.00
272183--272221
17
2.3
17
100
0
78
5
12
15
66
1.41
274166--274206
17
2.5
17
82
17
52
58
2
0
39
1.11
275649--275729
40
2.0
43
90
7
132
50
2
3
43
1.33
277734--277786
20
2.7
20
78
0
61
45
1
3
49
1.31
281643--281789
72
2.0
72
93
0
249
49
4
6
39
1.48
282646--282675
9
3.3
9
95
0
51
10
16
0
73
1.09
286164--286254
28
3.1
29
74
22
75
35
1
1
62
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292126--292160
15
2.3
15
100
0
70
25
0
0
74
0.82
292711--292748
19
2.0
19
89
0
58
34
0
2
63
1.09
292711--292827
10
12.7
9
65
17
53
30
3
4
61
1.32
292757--292790
17
1.9
18
94
5
61
23
2
2
70
1.15
293553--293583
2
15.5
2
100
0
62
51
0
0
48
1.00
294207--294231
3
8.3
3
100
0
50
32
0
0
68
0.90
300064--300143
42
1.9
42
92
0
133
41
8
20
30
1.82
302078--302226
58
2.6
58
84
3
174
49
10
14
25
1.75
303606--303639
2
17.0
2
100
0
68
0
50
0
50
1.00
303639--303671
2
16.5
2
100
0
66
48
0
0
51
1.00
307326--307364
20
1.9
21
94
5
71
35
2
0
61
1.10
307989--308020
6
5.3
6
96
0
55
71
0
12
15
1.14
308179--308263
40
2.1
40
81
12
95
64
2
3
29
1.22
308234--308286
27
2.0
27
85
7
72
58
1
3
35
1.27
308234--308286
28
2.0
26
85
7
70
58
1
3
35
1.27
309710--309776
16
4.2
16
80
0
80
29
23
2
43
1.69
309710--309776
32
2.1
32
88
0
98
29
23
2
43
1.69

Tables:   1   2

The End!