Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015135.1 Kokia drynarioides strain JFW-HI SEQ_130179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68598

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3668--3703
17
2.2
17
90
5
56
44
0
0
55
0.99
3668--3720
19
2.9
19
86
5
65
43
0
1
54
1.11
9824--9854
3
10.3
3
100
0
62
35
0
0
64
0.94
10666--10700
3
11.7
3
93
0
61
28
0
0
71
0.86
12011--12075
27
2.4
27
100
0
130
44
0
0
55
0.99
12284--12319
18
2.0
18
88
0
54
52
5
0
41
1.24
12384--12437
22
2.5
21
85
11
65
64
1
0
33
1.04
13834--13921
43
2.0
43
86
0
122
25
17
22
35
1.95
34228--34273
2
23.0
2
100
0
92
50
0
0
50
1.00
44446--44493
25
2.0
24
87
4
69
52
0
2
45
1.12
45254--45285
3
10.7
3
100
0
64
31
0
0
68
0.90
45722--45821
44
2.3
44
85
1
130
68
18
3
11
1.33
45739--45824
12
7.6
12
72
12
65
68
18
3
9
1.31
45725--45832
23
4.9
22
75
14
82
67
19
2
10
1.32
45725--45804
20
3.8
20
76
12
79
68
20
2
8
1.28
47644--47755
56
2.0
56
100
0
224
33
28
17
19
1.95
47704--47803
38
2.6
38
83
4
128
34
28
16
22
1.95
48781--48805
12
2.1
12
100
0
50
44
0
0
56
0.99
53435--53495
30
2.0
30
84
6
79
49
3
1
45
1.28
56784--56842
23
2.6
21
77
15
55
33
8
0
57
1.29
62942--63414
29
16.3
29
76
10
414
32
3
28
34
1.75
62947--63410
59
8.0
58
81
9
493
32
3
28
34
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65171--65213
17
2.6
16
89
10
68
60
2
0
37
1.10

Tables:   1

The End!