Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015186.1 Kokia drynarioides strain JFW-HI SEQ_130230, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  400691

Tables:   1   2   

This is table  2  of  2  ( 146 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
275777--275865
43
2.1
43
97
0
169
38
11
14
35
1.82
286159--286192
12
2.6
13
86
13
52
73
11
0
14
1.10
309058--309201
70
2.1
70
97
0
270
47
5
26
20
1.71
321813--321863
26
2.0
26
88
7
77
43
0
0
56
0.99
332051--332081
16
1.9
16
93
0
53
35
6
3
54
1.42
350094--350123
7
4.3
7
100
0
60
26
13
26
33
1.93
358010--358043
17
1.9
18
88
5
52
11
8
35
44
1.72
369608--369638
11
2.8
11
100
0
62
64
25
0
9
1.24
369701--369743
13
3.1
14
80
12
54
79
16
0
4
0.90
375419--375458
18
2.2
18
90
0
62
57
2
7
32
1.40
376648--376693
23
1.9
23
86
8
65
58
6
2
32
1.36
380711--380939
58
3.9
59
75
12
193
31
20
15
32
1.94
380673--380965
116
2.5
116
85
7
373
29
21
16
32
1.95
381264--381647
58
6.5
58
75
13
306
34
17
19
28
1.94
381264--381644
118
3.2
115
81
10
391
34
17
19
28
1.95
383458--383516
6
9.5
6
89
7
73
61
15
23
0
1.34
387110--387272
60
2.7
59
74
7
166
34
19
12
34
1.89
387702--387810
44
2.5
43
81
4
119
71
18
3
6
1.22
387761--387831
22
3.2
22
82
4
90
73
18
2
5
1.16
387761--387842
22
3.8
21
77
7
74
70
18
3
7
1.25
388466--388509
23
1.9
23
85
0
61
40
2
4
52
1.34
389481--390051
287
2.0
282
95
1
1016
36
14
19
29
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389763--390697
338
2.8
337
93
0
1600
37
14
19
28
1.92
391678--391740
30
2.1
30
100
0
126
33
9
28
28
1.88
393682--393734
26
2.0
26
100
0
106
22
7
26
43
1.80
396521--396615
46
2.0
47
81
4
111
38
17
10
32
1.84

Tables:   1   2

The End!