Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015206.1 Kokia drynarioides strain JFW-HI SEQ_130250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  388724

Tables:   1   2   

This is table  2  of  2  ( 163 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
277502--277552
21
2.4
21
84
12
61
25
0
3
70
1.04
282042--282098
29
2.0
29
82
6
71
31
1
7
59
1.34
284947--284995
25
1.9
25
83
4
62
59
0
8
32
1.27
295282--295307
2
13.0
2
100
0
52
50
0
0
50
1.00
295620--295654
17
1.9
19
88
11
56
17
0
14
68
1.21
296179--296237
21
2.9
21
85
7
77
35
0
1
62
1.05
299498--299617
64
1.9
64
82
6
154
35
7
5
52
1.51
311371--311418
24
2.0
25
87
4
71
50
4
14
31
1.62
313152--313197
16
2.6
18
83
10
51
30
6
4
58
1.43
321224--321310
43
2.0
43
95
0
156
19
17
27
35
1.94
321291--321478
94
2.0
93
97
1
358
25
18
26
29
1.98
323705--323741
2
18.5
2
100
0
74
48
0
0
51
1.00
326759--326792
6
5.7
6
100
0
68
50
0
50
0
1.00
328826--328868
20
2.2
20
95
0
77
55
9
11
23
1.64
328911--328944
17
2.0
17
88
0
50
41
8
5
44
1.60
328970--328996
14
1.9
14
100
0
54
37
14
18
29
1.91
331319--331435
23
5.1
23
67
12
69
52
3
1
41
1.28
334354--334383
2
15.0
2
100
0
60
0
50
0
50
1.00
335262--335304
16
2.7
15
85
7
59
34
0
9
55
1.32
339501--339751
55
4.2
58
81
10
242
25
17
11
45
1.82
339501--339659
31
5.5
31
68
21
110
24
17
11
46
1.81
339500--339730
115
2.0
116
80
7
265
23
17
11
47
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
340428--340479
26
1.9
28
84
7
72
48
0
7
44
1.31
353219--353255
17
2.1
18
90
5
58
51
5
0
43
1.24
354714--354776
25
2.6
23
78
12
65
30
1
0
68
0.99
356774--357318
277
2.0
277
89
0
849
32
22
14
30
1.94
358693--358767
28
2.7
27
84
10
89
37
5
22
34
1.77
358784--359055
29
9.3
27
71
17
124
34
3
25
36
1.73
358694--358826
28
4.6
28
68
14
76
39
5
21
33
1.76
358888--359101
29
7.2
30
74
15
169
33
4
25
36
1.75
358784--359097
58
5.3
58
80
8
284
33
3
24
37
1.74
358784--359101
59
5.4
59
80
8
271
33
3
24
38
1.74
360102--360138
19
1.9
19
88
0
56
40
8
2
48
1.47
360091--360169
9
8.7
9
69
8
52
39
6
2
51
1.41
360087--360163
15
5.1
15
70
9
57
38
5
2
53
1.37
360858--360920
6
11.0
6
76
10
60
50
1
0
47
1.10
360868--360913
17
2.7
17
93
0
74
52
2
0
45
1.13
361703--361728
2
13.0
2
100
0
52
50
0
0
50
1.00
369382--369416
15
2.3
15
85
0
52
22
0
2
74
0.95
369403--369455
19
2.7
19
75
11
54
24
3
5
66
1.31
369422--369499
22
3.6
21
75
16
79
21
3
3
70
1.20
379473--379514
20
2.1
20
95
0
75
47
9
7
35
1.64
383330--383523
69
2.8
67
76
11
205
43
12
10
33
1.77

Tables:   1   2

The End!